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-rw-r--r--academic/mkDSSP/makefile.patch76
1 files changed, 0 insertions, 76 deletions
diff --git a/academic/mkDSSP/makefile.patch b/academic/mkDSSP/makefile.patch
deleted file mode 100644
index 17563fde9a..0000000000
--- a/academic/mkDSSP/makefile.patch
+++ /dev/null
@@ -1,76 +0,0 @@
-Description: assorted fixes
- [Maarten L. Hekkelman <m.hekkelman@cmbi.ru.nl>]
- * DEST_DIR patched to DESTDIR
- .
- [Laszlo Kajan <lkajan@rostlab.org>]
- * stripping is patched out so that it can be done by dh into a debug package
- * line echo suppression is removed
- * spelling errors in man page fixed
- .
- Upstream is aware of this patch.
-Author: Maarten L. Hekkelman <m.hekkelman@cmbi.ru.nl>
-Author: Laszlo Kajan <lkajan@rostlab.org>
---- a/makefile
-+++ b/makefile
-@@ -11,18 +11,16 @@
-
- all: mkdssp
-
--include make.config
--
- VERSION = 2.2.1
-
- DEST_DIR ?= /usr/local
- LIB_DIR = $(BOOST_LIB_DIR)
- INC_DIR = $(BOOST_INC_DIR)
--BIN_DIR = $(DEST_DIR)/bin
--MAN_DIR = $(DEST_DIR)/man/man1
-+BIN_DIR = $(DESTDIR)$(DEST_DIR)/bin
-+MAN_DIR = $(DESTDIR)$(DEST_DIR)/share/man/man1
-
--BOOST_LIBS = thread filesystem program_options iostreams system
--LIBS = $(BOOST_LIBS:%=boost_%$(BOOST_LIB_SUFFIX)) z bz2
-+BOOST_LIBS = thread program_options iostreams system
-+LIBS = $(BOOST_LIBS:%=boost_%$(BOOST_LIB_SUFFIX))
-
- DEFINES = USE_COMPRESSION LINUX VERSION='"$(VERSION)"'
- CXX = g++
-@@ -49,22 +47,19 @@
- OBJECTS = $(OBJ_DIR)/mkdssp.o $(OBJ_DIR)/dssp.o $(OBJ_DIR)/primitives-3d.o $(OBJ_DIR)/structure.o $(OBJ_DIR)/utils.o $(OBJ_DIR)/mas.o $(OBJ_DIR)/iocif.o
-
- mkdssp: $(OBJECTS)
-- @ echo linking $@
-- @ $(CXX) -static -o $@ $^ $(LDOPTS)
-+ $(CXX) -o $@ $^ $(LDOPTS)
-
--include $(OBJECTS:%.o=%.d)
-+-include $(OBJECTS:%.o=%.d)
-
- $(OBJECTS:.o=.d):
-
- $(OBJ_DIR):
-- @ mkdir -p $(OBJ_DIR)
-+ mkdir -p $(OBJ_DIR)
-
- $(OBJ_DIR)/%.o: %.cpp | $(OBJ_DIR)
-- @ echo compiling $@
-- @ $(CXX) -MD -c -o $@ $< $(CFLAGS)
-+ $(CXX) -MD -c -o $@ $< $(CPPFLAGS) $(CFLAGS)
-
- clean:
-- install -d $(BIN_DIR) $(MAN_DIR)
- rm -rf $(OBJ_DIR)/* mkdssp
-
- install: mkdssp
-@@ -85,11 +80,3 @@
- @ cp doc/mkdssp.1 $(DIST_NAME)/doc/mkdssp.1
- tar czf $(DIST_NAME).tgz $(DIST_NAME)
- cp $(DIST_NAME).tgz dssp_$(VERSION).orig.tar.gz
--
--make.config:
-- @echo "creating empty make.config file"
-- @echo "# Set local options for make here" > make.config
-- @echo "#BOOST_LIB_SUFFIX = -mt" >> make.config
-- @echo "#BOOST_LIB_DIR = $(HOME)/projects/boost/lib" >> make.config
-- @echo "#BOOST_INC_DIR = $(HOME)/projects/boost/include" >> make.config
--