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author Petar Petrov2014-04-09 12:10:19 +0200
committer Willy Sudiarto Raharjo2014-04-09 12:10:31 +0200
commitd7885d5681195dab58ea1e72a32e56a09be1598c (patch)
tree9b5083fb02b60e0ae9a70c734bd4c0fd0b6e300b /academic/paml/paml.SlackBuild
parent1ee8b013c538183b4486aba9e705f1c82ff71278 (diff)
downloadslackbuilds-d7885d5681195dab58ea1e72a32e56a09be1598c.tar.gz
academic/paml: Updated for version 4.8.
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
Diffstat (limited to 'academic/paml/paml.SlackBuild')
-rw-r--r--academic/paml/paml.SlackBuild10
1 files changed, 5 insertions, 5 deletions
diff --git a/academic/paml/paml.SlackBuild b/academic/paml/paml.SlackBuild
index ab866fd536..c0c62ef3e2 100644
--- a/academic/paml/paml.SlackBuild
+++ b/academic/paml/paml.SlackBuild
@@ -2,7 +2,7 @@
# Slackware build script for paml
-# Copyright 2013 Petar Petrov, petar.petrov@student.oulu.fi
+# Copyright 2013-2014 Petar Petrov, petar.petrov@student.oulu.fi
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -23,7 +23,7 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
PRGNAM=paml
-VERSION=${VERSION:-4.7a}
+VERSION=${VERSION:-4.8}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
@@ -92,7 +92,7 @@ install -D -m755 yn00 $PKG/usr/bin/yn00
cc $SLKCFLAGS -DCodonNSbranches -o evolverNSbranches evolver.c tools.c -lm
cc $SLKCFLAGS -DCodonNSsites -o evolverNSsites evolver.c tools.c -lm
cc $SLKCFLAGS -DCodonNSbranchsites -o evolverNSbranchsites evolver.c tools.c -lm
-
+
install -D -m755 evolverNSbranches $PKG/usr/libexec/$PRGNAM/evolverNSbranches
install -D -m755 evolverNSbranchsites $PKG/usr/libexec/$PRGNAM/evolverNSbranchsites
install -D -m755 evolverNSsites $PKG/usr/libexec/$PRGNAM/evolverNSsites
@@ -140,10 +140,10 @@ find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | gr
| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
-cp -a \
- README.txt GeneticCode.txt doc/* src/README-compiling.txt \
+cp -a README.txt GeneticCode.txt doc/* src/README-compiling.txt \
Technical/{Pt/eigenQREV.pdf,Simulation/{multiruns.txt,Codon/README-codon.txt}}\
$PKG/usr/doc/$PRGNAM-$VERSION
+cat $CWD/MCMCtree.Tutorials.pdf > $PKG/usr/doc/$PRGNAM-$VERSION/MCMCtree.Tutorial.pdf
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
cat $CWD/LICENSE > $PKG/usr/doc/$PRGNAM-$VERSION/LICENSE