#!/bin/sh
# Slackware build script for ATLAS
# Copyright 2010 Serban Udrea <s.udrea@gsi.de>
# All rights reserved.
#
# Redistribution and use of this script, with or without modification,
# is permitted provided that the following conditions are met:
#
# 1. Redistributions of this script must retain the above copyright
# notice, this list of conditions and the following disclaimer.
#
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR ''AS IS'' AND ANY EXPRESS OR
# IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
# WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
# DISCLAIMED. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT,
# INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
# (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
# SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
# HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT,
# STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING
# IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
# POSSIBILITY OF SUCH DAMAGE.
PRGNAM=atlas
VERSION=${VERSION:-3.8.3}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
i?86) ARCH=i486 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
if [ "$ARCH" = "i486" ]; then
SLKCFLAGS="-O2 -march=i486 -mtune=i686"
LIBDIRSUFFIX=""
BITSize="32" # Specifically for ATLAS
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
LIBDIRSUFFIX=""
BITSize="32" # Specifically for ATLAS
elif [ "$ARCH" = "x86_64" ]; then
SLKCFLAGS="-O2 -fPIC"
LIBDIRSUFFIX="64"
BITSize="64" # Specifically for ATLAS
fi
# You may change this to adjust the maximal size IN BYTES(!) that ATLAS
# is allowed to allocate. According to the ATLAS errata, a too small
# value may strongly reduce threaded performance. The default value
# here is 256MB. (The default value in the ATLAS source is 64MB.)
#
MAX_MALLOC=${MAX_MALLOC:-268435456}
# If you don't want to use architectural defaults set the following to
# something like "no".
USE_ARCH_DEFAULTS=${USE_ARCH_DEFAULTS:-yes}
# The path to a reference BLAS library. By default it is assumed that you
# have installed the netlib BLAS reference using the appropriate slackbuild
# from slackbuilds.org. If this is not the case, you have to run this script
# with another value for REF_BLAS.
REF_BLAS=${REF_BLAS:-/usr/lib${LIBDIRSUFFIX}/libblas.a}
# Let's do a little check (that we deal with a regular file we can read).
[ -f "$REF_BLAS" -a -r "$REF_BLAS" ] || \
{ echo "ERROR: Wrong path to reference BLAS library, exiting! " && exit 1; }
# This is the system destination directory. When installing the
# package produced by this script, ATLAS's files will be written to
# $SYS_DESTDIR/include, $SYS_DESTDIR/include/atlas, $SYS_DESTDIR/lib
# or $SYS_DESTDIR/lib64 ond appropriate platforms, etc.
# Nevertheless, by default the documentation files go to
# /usr/doc/$PRGNAM-$VERSION. You may change this through the variable
# DEFAULT_DOCS, see below.
#
SYS_DESTDIR=${SYS_DESTDIR:-/usr}
# Check if SYS_DESTDIR is an absolute path. If not, exit with error.
# NOTE: The $ is used because echo adds a \n at the end of the string.
echo $SYS_DESTDIR | grep -vE '/\.\./|/\.\.$' | grep -qE '^/' || \
{ echo "ERROR: The system destination directory has no absolute path!" \
&& echo " The value of SYS_DESTDIR is $SYS_DESTDIR" \
&& echo " Please set it properly! " \
&& exit 1; }
# You may want to have the documentation files installed under
# $SYS_DESTDIR/doc/$PRGNAM-$VERSION not /usr/doc/$PRGNAM-$VERSION.
# To achieve this just set the following variable to something like
# "no".
#
DEFAULT_DOCS=${DEFAULT_DOCS:-yes}
# The build directory to be created within the source directory of
# ATLAS.
BLDdir=BuildDir
# Get the CPU frequency for good timing.
CPU_FREQ="$(cat /proc/cpuinfo |grep "cpu MHz"| head -n 1| cut -d ":" -s -f2| tr -d [:blank:])"
set -e
rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
cd $TMP
rm -rf $PRGNAM-$VERSION
tar xvf $CWD/${PRGNAM}${VERSION}.tar.bz2
mv ATLAS $PRGNAM-$VERSION
cd $PRGNAM-$VERSION
chown -R root:root .
find . \
\( -perm 777 -o -perm 775 -o -perm 711 -o -perm 555 -o -perm 511 \) \
-exec chmod 755 {} \; -o \
\( -perm 666 -o -perm 664 -o -perm 600 -o -perm 444 -o -perm 440 -o -perm 400 \) \
-exec chmod 644 {} \;
# Make changes as suggested in the atlas errata.
cat $CWD/atlas.patch | sed -e s%XXX_MaxMalloc_XXX%$MAX_MALLOC% | patch -p1
# If architectural defaults are to be used, copy the file mentioned in the errata
# to the architectural defaults directory.
case "$USE_ARCH_DEFAULTS" in
[yY]|[yY][eE]|[yY][eE][sS]) cp "$CWD/AMD64K10h64SSE3.tgz" CONFIG/ARCHS; USE_ARCH_DEFAULTS="1" ;;
*) USE_ARCH_DEFAULTS="0" ;;
esac
mkdir -p $BLDdir
cd $BLDdir
# Configure atlas.
# IMPORTANT: Here we assume that we are on a x86 machine (be it 32 or 64 bits)
# and gcc or icc is the compiler to be used. This should be presently
# a reasonable assumption with Slackware. Under other circumstances
# "-DPentiumCPS=$CPU_FREQ" has to be exchanged with "-DWALL".
#
../configure -Si cputhrchk 0 -Si archdef "$USE_ARCH_DEFAULTS" -b "$BITSize" -D c \
-DPentiumCPS="$CPU_FREQ" -Fa alg -fPIC
# NOTES ON THE FLAGS FOR CONFIGURE
#
# -Si cputhrchk 0 means that configure actually does not care about CPU
# throttling. This is to avoid false positives. Thus the full responsibility
# stays now with the user of the script.
# -Si archdef "$USE_ARCH_DEFAULTS" means that we ignore or not architectural defaults depending
# upon the value of "$USE_ARCH_DEFAULTS".
# -b "$BITSize" tells ATLAS about the platform's bitsize, 32 or 64.
# -D c -DPentiumCPS="$CPU_FREQ" is for achieving good timing on x86 platforms with gcc or icc.
# -Fa alg -fPIC is for beeing able to create dynamic libs too.
# The next two variables are set and their values are finally saved
# for using them to compile lapack.
# Remember the compiler name.
ATLAS_COMPILER="$(grep "F77 =" Make.inc | cut -d "=" -f1 --complement)"
# Remember the fortran compilation flags.
ATLAS_F77FLAGS="$(grep "F77FLAGS =" Make.inc | cut -d "=" -f1 --complement)"
# Set the path to the reference BLAS.
sed -i -e '/^ \+BLASlib/s%BLASlib = .*%BLASlib = '"$REF_BLAS"% \
Make.inc
make -j1
make check
# If parallel libraries have been compiled check them too.
if [ -f lib/libptcblas.a ]; then
make ptcheck
PARALLEL_LIBS="yes" # We will use this when creating dynamic libs.
fi
# Install the static libs created during the build process.
make install DESTDIR=$PKG$SYS_DESTDIR
# Go to the ATLAS $BLDdir/lib directory and try to create and install
# the dynamic libraries.
# NOTE: The test for the presence of static parallel libs and the command to actually build the
# shared parallel libs are connected by a logical OR to make sure that the subshell
# does not exit with non-zero error code just because static parallel libs didn't
# get built. Therefore the test is successful if the variable PARALLEL_LIBS is unset or
# empty, i.e. when no static parallel libs got built.
( cd lib && make shared && \
{ [ "${PARALLEL_LIBS}1" = "1" ] || make ptshared; } && \
cp -p *.so "$PKG$SYS_DESTDIR/lib"
)
find $PKG | xargs file | grep -e "executable" -e "shared object" | grep ELF \
| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
# This is probably the easiest way to make sure that we install in the
# proper place.
if [ ! -z $LIBDIRSUFFIX ]; then
mv $PKG$SYS_DESTDIR/lib $PKG$SYS_DESTDIR/lib${LIBDIRSUFFIX}
fi
# Create the doc directory for atlas and populate it.
case "$DEFAULT_DOCS" in
[nN]|[nN][oO]) DOC_DIR="$PKG$SYS_DESTDIR/doc/$PRGNAM-$VERSION" ;;
*) DOC_DIR="$PKG/usr/doc/$PRGNAM-$VERSION" ;;
esac
mkdir -p $DOC_DIR
cp -a ../INSTALL.txt ../README ../doc $DOC_DIR
# The following makefiles may be needed to merge atlas and lapack.
mkdir $DOC_DIR/MAKEFILES
cp -p Make.inc $DOC_DIR/MAKEFILES
cp -p lib/Makefile $DOC_DIR/MAKEFILES/Makefile.lib
# Create a file with the build flags for atlas. Needed to merge
# ATLAS and LAPACK. The LAPACK SlackBuild will just have to source
# this file to find out the compiler used for ATLAS and the build
# flags.
echo "ATLAS_COMPILER=\"$ATLAS_COMPILER\"" > "$DOC_DIR/SETTINGS"
echo "ATLAS_F77FLAGS=\"$ATLAS_F77FLAGS\"" >> "$DOC_DIR/SETTINGS"
sed -i -e s'%=" %="%' "$DOC_DIR/SETTINGS" # Remove the extra space after the "=" sign
echo "ATLAS_NOOPT=\"-O0\" #Eventually add more options within the quotes." >> "$DOC_DIR/SETTINGS"
# Add the Slackbuild script and README.SLACKWARE to the docs.
cat $CWD/$PRGNAM.SlackBuild > $DOC_DIR/$PRGNAM.SlackBuild
cat $CWD/README.SLACKWARE > $DOC_DIR/README.SLACKWARE
mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd "$PKG"
/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
|
