path: root/academic
AgeCommit message (Expand)Author
2019-04-20academic/Gridcoin-Research: Updated for version Edward W. Koenig
2019-04-19academic/cvc4: Updated for version 1.7. Nick Smallbone
2019-04-13academic/pyCRAC: Updated for version 1.4.4. Rob van Nues
2019-04-13academic/novocraft: Updated for version 3.09.02. Rob van Nues
2019-04-13academic/bowtie2: Updated for version 2.3.5. Rob van Nues
2019-04-12academic/locarna: Added (Local RNA alignment on structural basis). Rob van Nues
2019-04-12academic/ViennaRNA: Added (C Library). Rob van Nues
2019-04-12academic/gri: Added (graphics language). Rob van Nues
2019-04-12academic/STAR: Updated for version 2.7.0f. Rob van Nues
2019-04-11academic/octave: Update DEP. Willy Sudiarto Raharjo
2019-03-29academic/R: Updated for version 3.5.3. Andrew Payne
2019-03-24academic/cryptominisat: Updated for version 5.6.8. Alan Aversa
2019-03-23academic/cvc4: Added (Theorem Solver). Nick Smallbone
2019-03-23academic/ed-v6: Added (old version of ed). Dave Woodfall
2019-03-23academic/z3: Added (theorem solver). Nick Smallbone
2019-03-22academic/copasi: Updated for version 4.25.207. Pedro Mendes
2019-03-16academic/octave: Updated for version 5.1.0. Kyle Guinn
2019-03-16academic/SU2: Added (Open Source CFD Code). Judah Milgram
2019-03-16academic/R: Updated for version 3.5.2 + new maintainer. Andrew Payne
2019-03-16academic/scidavis: Updated for version 1.25. Fellype do Nascimento
2019-03-16academic/gwyddion: Updated for version 2.53. Daniil Bratashov
2019-02-23academic/eprover: Added (a first-order theorem prover). Nick Smallbone
2019-02-17academic/suitesparse: Updated for version 5.4.0 Christoph Willing
2019-02-17academic/qalculate-gtk: Updated for version 2.9.0 Larry Hajali
2019-02-17academic/libqalculate: Updated for version 2.9.0 Larry Hajali
2019-02-15academic/STAR: Updated for version 2.7.0c. Rob van Nues
2019-02-08academic/sympy: Updated for version 1.3. Serban Udrea
2019-02-08academic/ngspice: Update script. R. S. Ananda Murthy
2019-02-08academic/scipy3: Updated for version 1.1.0. Serban Udrea
2019-02-08academic/scipy: Update script. Serban Udrea
2019-02-02academic/Mnemosyne: Updated for version 2.6.1. R. S. Ananda Murthy
2019-02-02academic/STAR: Updated for version 2.7.0a. Rob van Nues
2019-02-02academic/lapacke: Build the deprecated routines. Kyle Guinn
2019-02-02academic/ngspice: Add shared library. R. S. Ananda Murthy
2019-02-01academic/xflr5: Updated for version 6.43. Daniel Prosser
2019-01-25academic/fet Updated for version 5.37.5. R.S.Ananda Murthy
2019-01-24academic/zotero: Updated for version 5.0.60. Andrew Payne
2019-01-24academic/ncbi-blast+: Updated for version 2.8.1. Petar Petrov
2019-01-19academic/arpack-ng: Updated for version 3.7.0. Kyle Guinn
2019-01-18academic/pysam: Updated for version 0.15.2. Rob van Nues
2019-01-18academic/gpredict: Updated for version 2.3. Yth - Arnaud
2019-01-13academic/ngspice: Fix build. R. S. Ananda Murthy
2019-01-09academic/cufflinks: Update DEPS. Petar Petrov
2019-01-09academic/samtools-legacy: Fix path. Petar Petrov
2019-01-09academic/ngspice: Updated for version 30. R. S. Ananda Murthy
2019-01-05academic/octave: Updated for version 4.4.1. Kyle Guinn
2019-01-05academic/arpack-ng: Updated for version 3.6.3. Kyle Guinn
2019-01-05academic/qrupdate: Update URLs and patches. Kyle Guinn
2019-01-05academic/spqr: Updated for version 2.0.9. Kyle Guinn
2019-01-05academic/umfpack: Updated for version 5.7.8. Kyle Guinn
2019-01-05academic/klu: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/cholmod: Updated for version 3.0.13. Kyle Guinn
2019-01-05academic/rbio: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/btf: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/ldl: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/cxsparse: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/csparse: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/ccolamd: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/colamd: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/camd: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/amd: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/suitesparseconfig: Updated for version 5.4.0. Kyle Guinn
2019-01-05academic/pari: Updated for version 2.11.1. Joachim Kruth
2019-01-05academic/samtools: Updated for version 1.9 + new maintainer. Rob van Nues
2019-01-05academic/bcftools: Added (BCF calling tools). Rob van Nues
2019-01-05academic/bowtie2: Updated for version + new maintainer. Rob van Nues
2019-01-05academic/ngspice: Updated for version 29. R. S. Ananda Murthy
2018-12-25academic/cryptominisat: Fix MD5SUM. Willy Sudiarto Raharjo
2018-12-24academic/kraken: Added (Assigning Taxonomic Labels). Petar Petrov
2018-12-24academic/jellyfish_k-mer: Added (k-mers counting tools). Petar Petrov
2018-12-24academic/ugene: Updated for version 1.31.1. Petar Petrov
2018-12-24academic/trimmomatic: Added (Trimming Tool). Petar Petrov
2018-12-24academic/ncbi-rmblastn: Update DEP. Petar Petrov
2018-12-24academic/ncbi-blast-plus: Removed (Use ncbi-blast+). Willy Sudiarto Raharjo
2018-12-24academic/ImageJ: Removed (Use fiji). Willy Sudiarto Raharjo
2018-12-24academic/ij-plugins-UCSD: Removed (Use fiji). Willy Sudiarto Raharjo
2018-12-24academic/ij-plugins-LOCI: Removed (Use fiji). Willy Sudiarto Raharjo
2018-12-24academic/fiji: Added (ImageJ Distribution). Petar Petrov
2018-12-24academic/wehi-weasel: Updated for version Petar Petrov
2018-12-24academic/vcftools: Updated for version 0.1.16. Petar Petrov
2018-12-24academic/hyphy: Updated for version 2.3.14. Petar Petrov
2018-12-24academic/stringtie: Added (Assembler of RNA-Seq alignments). Petar Petrov
2018-12-24academic/tabix-legacy: Added (Generic indexer). Petar Petrov
2018-12-24academic/spades: Updated for version 3.13.0. Petar Petrov
2018-12-24academic/samtools-legacy: Added (Sequence Alignment/Map Tools). Petar Petrov
2018-12-24academic/ncbi-blast+: Added (BLAST+ Command Line Applications). Petar Petrov
2018-12-24academic/ncbi-blast: Update script. Petar Petrov
2018-12-24academic/megax: Updated for version 10.0.5_1. Petar Petrov
2018-12-24academic/mafft: Updated for version 7.407. Petar Petrov
2018-12-24academic/diamond: Added (A sequence aligner). Petar Petrov
2018-12-24academic/clark-ugene: Added (supervised sequence classification). Petar Petrov
2018-12-24academic/bppsuite: Updated for version 2.4.1. Petar Petrov
2018-12-24academic/bpp-seq-omics: Updated for version 2.4.1. Petar Petrov
2018-12-24academic/bpp-seq: Updated for version 2.4.1. Petar Petrov
2018-12-24academic/bpp-popgen: Updated for version 2.4.1. Petar Petrov
2018-12-24academic/bpp-phyl-omics: Updated for version 2.4.1. Petar Petrov
2018-12-24academic/bpp-phyl: Updated for version 2.4.1. Petar Petrov
2018-12-24academic/bpp-core: Updated for version 2.4.1. Petar Petrov
2018-12-24academic/bowtie2-legacy: Added (aligning sequencing reads). Petar Petrov
2018-12-24academic/archaeopteryx: Updated for version 0.9928b. Petar Petrov