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-rw-r--r--academic/Gridcoin-Research/Gridcoin-Research.SlackBuild2
-rw-r--r--academic/Gridcoin-Research/Gridcoin-Research.info6
-rw-r--r--academic/Gridcoin-Research/README4
-rw-r--r--academic/R/R.SlackBuild2
-rw-r--r--academic/R/R.info6
-rw-r--r--academic/bcftools/bcftools.SlackBuild6
-rw-r--r--academic/bcftools/bcftools.info6
-rw-r--r--academic/cadabra2/cadabra2.SlackBuild2
-rw-r--r--academic/cadabra2/cadabra2.info8
-rw-r--r--academic/cdo/cdo.SlackBuild2
-rw-r--r--academic/cdo/cdo.info6
-rw-r--r--academic/copasi/copasi.SlackBuild2
-rw-r--r--academic/copasi/copasi.info10
-rw-r--r--academic/engauge/engauge.SlackBuild13
-rw-r--r--academic/fet/fet.SlackBuild2
-rw-r--r--academic/fet/fet.info6
-rw-r--r--academic/gaiasky/gaiasky.SlackBuild2
-rw-r--r--academic/gaiasky/gaiasky.info6
-rw-r--r--academic/gcompris-qt/gcompris-qt.SlackBuild2
-rw-r--r--academic/gcompris-qt/gcompris-qt.info10
-rw-r--r--academic/gri/UTF8patch.README19
-rw-r--r--academic/gri/gri-texinfo-6.7patch.txt10
-rw-r--r--academic/gri/gri.SlackBuild15
-rw-r--r--academic/gri/gri.info6
-rw-r--r--academic/gri/texinfo-utf8.patch12
-rw-r--r--academic/gwyddion/gwyddion.SlackBuild2
-rw-r--r--academic/gwyddion/gwyddion.info6
-rw-r--r--academic/magic/magic.SlackBuild22
-rw-r--r--academic/magic/magic.info6
-rw-r--r--academic/molden/README29
-rw-r--r--academic/molden/molden.SlackBuild95
-rw-r--r--academic/molden/molden.info10
-rw-r--r--academic/molden/slack-desc19
-rw-r--r--academic/nco/nco.SlackBuild2
-rw-r--r--academic/nco/nco.info6
-rw-r--r--academic/openboard/openboard.SlackBuild2
-rw-r--r--academic/openboard/openboard.info6
-rw-r--r--academic/plus42/plus42.SlackBuild2
-rw-r--r--academic/plus42/plus42.info6
-rw-r--r--academic/pspp/pspp.SlackBuild2
-rw-r--r--academic/pspp/pspp.info6
-rw-r--r--academic/samtools/samtools.SlackBuild12
-rw-r--r--academic/samtools/samtools.info6
-rw-r--r--academic/smath-studio/smath-studio.SlackBuild2
-rw-r--r--academic/smath-studio/smath-studio.desktop2
-rw-r--r--academic/smath-studio/smath-studio.info6
-rw-r--r--academic/stellarsolver/stellarsolver.info8
-rw-r--r--academic/xsimd/xsimd.SlackBuild4
-rw-r--r--academic/xsimd/xsimd.info6
49 files changed, 272 insertions, 160 deletions
diff --git a/academic/Gridcoin-Research/Gridcoin-Research.SlackBuild b/academic/Gridcoin-Research/Gridcoin-Research.SlackBuild
index 9a04eb6fc4..7ef6e2ceba 100644
--- a/academic/Gridcoin-Research/Gridcoin-Research.SlackBuild
+++ b/academic/Gridcoin-Research/Gridcoin-Research.SlackBuild
@@ -25,7 +25,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=Gridcoin-Research
-VERSION=${VERSION:-5.4.7.0}
+VERSION=${VERSION:-5.4.8.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
diff --git a/academic/Gridcoin-Research/Gridcoin-Research.info b/academic/Gridcoin-Research/Gridcoin-Research.info
index a28295c32f..8db3ea0b94 100644
--- a/academic/Gridcoin-Research/Gridcoin-Research.info
+++ b/academic/Gridcoin-Research/Gridcoin-Research.info
@@ -1,8 +1,8 @@
PRGNAM="Gridcoin-Research"
-VERSION="5.4.7.0"
+VERSION="5.4.8.0"
HOMEPAGE="https://gridcoin.us/"
-DOWNLOAD="https://github.com/gridcoin-community/Gridcoin-Research/archive/5.4.7.0/Gridcoin-Research-5.4.7.0.tar.gz"
-MD5SUM="8c42dfd8deaa754d78aa248785e724b0"
+DOWNLOAD="https://github.com/gridcoin-community/Gridcoin-Research/archive/5.4.8.0/Gridcoin-Research-5.4.8.0.tar.gz"
+MD5SUM="69a861f7eca09f6142c8e737744ad9fd"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
diff --git a/academic/Gridcoin-Research/README b/academic/Gridcoin-Research/README
index 2fc9a1a4f5..53cc2f8645 100644
--- a/academic/Gridcoin-Research/README
+++ b/academic/Gridcoin-Research/README
@@ -34,6 +34,6 @@ release notes on
https://github.com/gridcoin-community/Gridcoin-Research/releases
** NOTE: **
-This is a MANDATORY upgrade for versions 5.4.5 and below to fix an
+While this is a LEISURE update, you are highly encouraged to upgrade.
+Included are additonal fixes and improvements releated to the recent
inadvertent fork as a result of an inadvertent protocol change.
-If you are already on 5.4.6 this upgrade is "leisure."
diff --git a/academic/R/R.SlackBuild b/academic/R/R.SlackBuild
index 3ee98369fc..97b5d3a22b 100644
--- a/academic/R/R.SlackBuild
+++ b/academic/R/R.SlackBuild
@@ -26,7 +26,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=R
-VERSION=${VERSION:-4.3.3}
+VERSION=${VERSION:-4.4.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
diff --git a/academic/R/R.info b/academic/R/R.info
index 45cf892f94..6c12168093 100644
--- a/academic/R/R.info
+++ b/academic/R/R.info
@@ -1,8 +1,8 @@
PRGNAM="R"
-VERSION="4.3.3"
+VERSION="4.4.0"
HOMEPAGE="https://www.r-project.org/"
-DOWNLOAD="https://cran.r-project.org/src/base/R-4/R-4.3.3.tar.xz"
-MD5SUM="5602f5996107c346dba12a16e866d2e2"
+DOWNLOAD="https://cran.r-project.org/src/base/R-4/R-4.4.0.tar.xz"
+MD5SUM="647ef3e012e9cf36a187db64a6082217"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
diff --git a/academic/bcftools/bcftools.SlackBuild b/academic/bcftools/bcftools.SlackBuild
index b7a8433557..ad6f5d7181 100644
--- a/academic/bcftools/bcftools.SlackBuild
+++ b/academic/bcftools/bcftools.SlackBuild
@@ -2,7 +2,7 @@
# Slackware build script for bcftools
-# Copyright 2017-2023 Rob van Nues # All rights reserved.
+# Copyright 2017-2024 Rob van Nues # All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
# permitted provided that the following conditions are met:
@@ -24,8 +24,8 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bcftools
-VERSION=${VERSION:-1.19}
-HTSLIBV=${HTSLIBV:-1.19}
+VERSION=${VERSION:-1.20}
+HTSLIBV=${HTSLIBV:-1.20}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
diff --git a/academic/bcftools/bcftools.info b/academic/bcftools/bcftools.info
index 1998ed001c..84e5bb039b 100644
--- a/academic/bcftools/bcftools.info
+++ b/academic/bcftools/bcftools.info
@@ -1,8 +1,8 @@
PRGNAM="bcftools"
-VERSION="1.19"
+VERSION="1.20"
HOMEPAGE="http://www.htslib.org"
-DOWNLOAD="https://github.com/samtools/bcftools/releases/download/1.19/bcftools-1.19.tar.bz2"
-MD5SUM="9b4e8be279024d19f36bbaad1d2bdb41"
+DOWNLOAD="https://github.com/samtools/bcftools/releases/download/1.20/bcftools-1.20.tar.bz2"
+MD5SUM="5cfb124c7d9e4db6c5a4e6080a2f27f8"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="htslib"
diff --git a/academic/cadabra2/cadabra2.SlackBuild b/academic/cadabra2/cadabra2.SlackBuild
index dff731aad7..0172ff5550 100644
--- a/academic/cadabra2/cadabra2.SlackBuild
+++ b/academic/cadabra2/cadabra2.SlackBuild
@@ -25,7 +25,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=cadabra2
-VERSION=${VERSION:-2.4.5.6}
+VERSION=${VERSION:-2.4.5.7}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
diff --git a/academic/cadabra2/cadabra2.info b/academic/cadabra2/cadabra2.info
index 54385565de..19fe764208 100644
--- a/academic/cadabra2/cadabra2.info
+++ b/academic/cadabra2/cadabra2.info
@@ -1,10 +1,10 @@
PRGNAM="cadabra2"
-VERSION="2.4.5.6"
+VERSION="2.4.5.7"
HOMEPAGE="https://cadabra.science"
-DOWNLOAD="https://github.com/kpeeters/cadabra2/archive/2.4.5.6/cadabra2-2.4.5.6.tar.gz"
-MD5SUM="769833ed91bb6999cdf86bd3f26710a7"
+DOWNLOAD="https://github.com/kpeeters/cadabra2/archive/2.4.5.7/cadabra2-2.4.5.7.tar.gz"
+MD5SUM="0114198388cc3d11e7318a1319b46aae"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="python3-matplotlib python3-gmpy2 python3-sympy"
+REQUIRES="importlib-resources python3-matplotlib python3-gmpy2 python3-sympy"
MAINTAINER="Alexander Verbovetsky"
EMAIL="alik@ejik.org"
diff --git a/academic/cdo/cdo.SlackBuild b/academic/cdo/cdo.SlackBuild
index bc0583a4da..391849b54d 100644
--- a/academic/cdo/cdo.SlackBuild
+++ b/academic/cdo/cdo.SlackBuild
@@ -25,7 +25,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=cdo
-VERSION=${VERSION:-2.4.0}
+VERSION=${VERSION:-2.4.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
diff --git a/academic/cdo/cdo.info b/academic/cdo/cdo.info
index f3ca4cd66b..3278317b47 100644
--- a/academic/cdo/cdo.info
+++ b/academic/cdo/cdo.info
@@ -1,10 +1,10 @@
PRGNAM="cdo"
-VERSION="2.4.0"
+VERSION="2.4.1"
HOMEPAGE="https://code.mpimet.mpg.de/projects/cdo"
DOWNLOAD="UNSUPPORTED"
MD5SUM=""
-DOWNLOAD_x86_64="https://code.mpimet.mpg.de/attachments/download/29313/cdo-2.4.0.tar.gz"
-MD5SUM_x86_64="797d3c2257f73937dc95b280dd21fd8b"
+DOWNLOAD_x86_64="https://code.mpimet.mpg.de/attachments/download/29421/cdo-2.4.1.tar.gz"
+MD5SUM_x86_64="e25f9440a08c4c1fd6f99e1359c21d0e"
REQUIRES="proj udunits netcdf eccodes"
MAINTAINER="ArTourter"
EMAIL="artourter@gmail.com"
diff --git a/academic/copasi/copasi.SlackBuild b/academic/copasi/copasi.SlackBuild
index 0a6da4fcfd..732cd916d9 100644
--- a/academic/copasi/copasi.SlackBuild
+++ b/academic/copasi/copasi.SlackBuild
@@ -25,7 +25,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=copasi
-VERSION=${VERSION:-4.42.284}
+VERSION=${VERSION:-4.43.288}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
diff --git a/academic/copasi/copasi.info b/academic/copasi/copasi.info
index 75e1b966a6..2840e1662d 100644
--- a/academic/copasi/copasi.info
+++ b/academic/copasi/copasi.info
@@ -1,10 +1,10 @@
PRGNAM="copasi"
-VERSION="4.42.284"
+VERSION="4.43.288"
HOMEPAGE="https://copasi.org"
-DOWNLOAD="https://github.com/copasi/COPASI/releases/download/Build-284/COPASI-4.42.284-Linux-32bit.sh"
-MD5SUM="66ae94a23f8d7745835e3639f1c567f6"
-DOWNLOAD_x86_64="https://github.com/copasi/COPASI/releases/download/Build-284/COPASI-4.42.284-Linux-64bit.sh"
-MD5SUM_x86_64="87f09230f64ea4c69a6695963e4f2594"
+DOWNLOAD="https://github.com/copasi/COPASI/releases/download/Build-288/COPASI-4.43.288-Linux-32bit.sh"
+MD5SUM="2eb1afccd0697ab7b75a1177e89ce15b"
+DOWNLOAD_x86_64="https://github.com/copasi/COPASI/releases/download/Build-288/COPASI-4.43.288-Linux-64bit.sh"
+MD5SUM_x86_64="cf48d9dd2672f1ba676ddc457b71c91d"
REQUIRES=""
MAINTAINER="Pedro Mendes"
EMAIL="pedro@gepasi.org"
diff --git a/academic/engauge/engauge.SlackBuild b/academic/engauge/engauge.SlackBuild
index 2840fef1ae..9e50371be3 100644
--- a/academic/engauge/engauge.SlackBuild
+++ b/academic/engauge/engauge.SlackBuild
@@ -37,9 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
-# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
-# the name of the created package would be, and then exit. This information
-# could be useful to other scripts.
if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
exit 0
@@ -81,7 +78,7 @@ find -L . \
POPPLER_INCLUDE=/usr/include/poppler/qt5 \
POPPLER_LIB=/usr/lib${LIBDIRSUFFIX} \
-OPENJPEG_INCLUDE=/usr/include/openjpeg-2.4 \
+OPENJPEG_INCLUDE=/usr/include/openjpeg-2.5 \
OPENJPEG_LIB=/usr/lib${LIBDIRSUFFIX} \
qmake-qt5 \
QMAKE_CFLAGS+="$SLKCFLAGS" \
@@ -113,10 +110,10 @@ cp -a engauge-0.png $PKG/usr/share/pixmaps/engauge.png
mkdir -p $PKG/usr/share/applications
cp $CWD/$PRGNAM.desktop $PKG/usr/share/applications/$PRGNAM.desktop
-mkdir -p $PKG/usr/doc/$PRGNAM
-cp -ar INSTALL LICENSE README.md $PKG/usr/doc/$PRGNAM
-cp -ar bin/documentation/engauge.q* $PKG/usr/doc/$PRGNAM
-cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM/$PRGNAM.SlackBuild
+mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
+cp -ar INSTALL LICENSE README.md $PKG/usr/doc/$PRGNAM-$VERSION
+cp -ar bin/documentation/engauge.q* $PKG/usr/doc/$PRGNAM-$VERSION
+cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
find $PKG/usr/doc -type f -exec chmod 0644 {} \;
mkdir -p $PKG/install
diff --git a/academic/fet/fet.SlackBuild b/academic/fet/fet.SlackBuild
index 6962abec49..3878fab0fa 100644
--- a/academic/fet/fet.SlackBuild
+++ b/academic/fet/fet.SlackBuild
@@ -25,7 +25,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=fet
-VERSION=${VERSION:-6.19.3}
+VERSION=${VERSION:-6.20.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
diff --git a/academic/fet/fet.info b/academic/fet/fet.info
index 2093219a59..fa66ae72fc 100644
--- a/academic/fet/fet.info
+++ b/academic/fet/fet.info
@@ -1,8 +1,8 @@
PRGNAM="fet"
-VERSION="6.19.3"
+VERSION="6.20.0"
HOMEPAGE="https://www.lalescu.ro/liviu/fet/"
-DOWNLOAD="https://www.lalescu.ro/liviu/fet/download/fet-6.19.3.tar.bz2"
-MD5SUM="5af48c9d1fdf303d7f2ed8ec306a257d"
+DOWNLOAD="https://www.lalescu.ro/liviu/fet/download/fet-6.20.0.tar.bz2"
+MD5SUM="59abd47142c0d359847e8597c8b6b78b"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
diff --git a/academic/gaiasky/gaiasky.SlackBuild b/academic/gaiasky/gaiasky.SlackBuild
index a736f4b832..9c9acb2004 100644
--- a/academic/gaiasky/gaiasky.SlackBuild
+++ b/academic/gaiasky/gaiasky.SlackBuild
@@ -27,7 +27,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=gaiasky
-VERSION=${VERSION:-"3.6.0"}
+VERSION=${VERSION:-"3.6.2"}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
diff --git a/academic/gaiasky/gaiasky.info b/academic/gaiasky/gaiasky.info
index ecb5220e4e..fc8b0406e5 100644
--- a/academic/gaiasky/gaiasky.info
+++ b/academic/gaiasky/gaiasky.info
@@ -1,10 +1,10 @@
PRGNAM="gaiasky"
-VERSION="3.6.0"
+VERSION="3.6.2"
HOMEPAGE="https://zah.uni-heidelberg.de/gaia/outreach/gaiasky"
DOWNLOAD="UNSUPPORTED"
MD5SUM=""
-DOWNLOAD_x86_64="https://gaia.ari.uni-heidelberg.de/gaiasky/releases/3.6.0.afdd9547d/gaiasky_linux_3_6_0.deb"
-MD5SUM_x86_64="f681a23056f157d1a7dc4257318dd16c"
+DOWNLOAD_x86_64="https://gaia.ari.uni-heidelberg.de/gaiasky/releases/3.6.2.1b1e23dbb/gaiasky_linux_3_6_2.deb"
+MD5SUM_x86_64="9b2b54aea7df8d9bd21bb5fcf24591e1"
REQUIRES="zulu-openjdk17"
MAINTAINER="Giancarlo Dessi"
EMAIL="slack@giand.it"
diff --git a/academic/gcompris-qt/gcompris-qt.SlackBuild b/academic/gcompris-qt/gcompris-qt.SlackBuild
index 01ad6255dc..fe6f2b12f9 100644
--- a/academic/gcompris-qt/gcompris-qt.SlackBuild
+++ b/academic/gcompris-qt/gcompris-qt.SlackBuild
@@ -29,7 +29,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=gcompris-qt
-VERSION=${VERSION:-4.0}
+VERSION=${VERSION:-4.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
diff --git a/academic/gcompris-qt/gcompris-qt.info b/academic/gcompris-qt/gcompris-qt.info
index 835328b6ce..5b25add105 100644
--- a/academic/gcompris-qt/gcompris-qt.info
+++ b/academic/gcompris-qt/gcompris-qt.info
@@ -1,10 +1,10 @@
PRGNAM="gcompris-qt"
-VERSION="4.0"
+VERSION="4.1"
HOMEPAGE="https://gcompris.net/"
-DOWNLOAD="https://gcompris.net/download/qt/linux/gcompris-qt-4.0-Linux32.sh"
-MD5SUM="c28334c56e8c7f74888a2b641cbcca6f"
-DOWNLOAD_x86_64="https://gcompris.net/download/qt/linux/gcompris-qt-4.0-Linux64.sh"
-MD5SUM_x86_64="3f0714ef303ea3bc3799b614bcbd5857"
+DOWNLOAD="https://gcompris.net/download/qt/linux/gcompris-qt-4.1-Linux32.sh"
+MD5SUM="19814edd3512a9c3612084d14afcc0aa"
+DOWNLOAD_x86_64="https://gcompris.net/download/qt/linux/gcompris-qt-4.1-Linux64.sh"
+MD5SUM_x86_64="6084c6f26a53ab74a51c45c1f10429bf"
REQUIRES=""
MAINTAINER="Willy Sudiarto Raharjo"
EMAIL="willysr@slackbuilds.org"
diff --git a/academic/gri/UTF8patch.README b/academic/gri/UTF8patch.README
deleted file mode 100644
index f30c7c969b..0000000000
--- a/academic/gri/UTF8patch.README
+++ /dev/null
@@ -1,19 +0,0 @@
-Compilation of gri breaks on doc/gri.texi with current tex-info.
-
-"It is because Texinfo 6.7 changed the default input encoding to UTF-8
-and the input is in ISO-8859-1. The easiest way to fix this would be to
-convert the input file to UTF-8, but you could also add
-"@documentencoding ISO-8859-1" to the file."
-(from email correspondence with texinfo developers)
-
-The patchfile 'gri-texinfo-6.7patch.txt' set the whole file to ISO-8859-1
-and does not alter the contributor's name.
-
-
-The other patchfile, 'texinfo-utf8.patch', was generated by Matteo Bernardini
-(http://cgit.ponce.cc/slackbuilds/commit/?h=gri), and changes the accented o in the name.
-
-Either patch allows compilation of gri.
-
-see:
-https://www.linuxquestions.org/questions/slackware-14/sbo-scripts-not-building-on-current-read-1st-post-pls-4175561999/page142.html#post6049662 \ No newline at end of file
diff --git a/academic/gri/gri-texinfo-6.7patch.txt b/academic/gri/gri-texinfo-6.7patch.txt
deleted file mode 100644
index f9b2dedf91..0000000000
--- a/academic/gri/gri-texinfo-6.7patch.txt
+++ /dev/null
@@ -1,10 +0,0 @@
-diff -Naur gri-2.12.23/doc/gri.texi gri-2.12.23-new/doc/gri.texi
---- gri-2.12.23/doc/gri.texi 2017-08-24 15:31:52.000000000 +0100
-+++ gri-2.12.23-new/doc/gri.texi 2019-10-22 16:13:33.476840964 +0100
-@@ -1,5 +1,5 @@
- \input texinfo
--
-+@documentencoding ISO-8859-1
- @c
- @comment *** Start of HTML stuff ***
- @comment # HTML support, via comments in texinfo:
diff --git a/academic/gri/gri.SlackBuild b/academic/gri/gri.SlackBuild
index baa6a4e266..a611905cbe 100644
--- a/academic/gri/gri.SlackBuild
+++ b/academic/gri/gri.SlackBuild
@@ -2,7 +2,7 @@
# Slackware build script for gri
-# Copyright 2018-2019 Rob van Nues
+# Copyright 2018-2024 Rob van Nues
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -25,7 +25,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=gri
-VERSION=${VERSION:-2.12.23}
+VERSION=${VERSION:-2.12.27}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
@@ -38,9 +38,6 @@ if [ -z "$ARCH" ]; then
esac
fi
-# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
-# the name of the created package would be, and then exit. This information
-# could be useful to other scripts.
if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
exit 0
@@ -79,10 +76,6 @@ find -L . \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
-#with thanks to Gavin Smith
-patch -p1 < $CWD/gri-texinfo-6.7patch.txt
-#with thanks to Matteo Bernardini
-#patch -p1 < $CWD/texinfo-utf8.patch
aclocal
autoconf
@@ -96,8 +89,6 @@ CXXFLAGS="$SLKCFLAGS" \
--docdir=/usr/doc/$PRGNAM-$VERSION \
--build=$ARCH-slackware-linux
-#with thanks to Matteo Bernardini
-#see: https://www.linuxquestions.org/questions/slackware-14/sbo-scripts-not-building-on-current-read-1st-post-pls-4175561999/page142.html#post6049662
make -j1
make -j1 install DESTDIR=$PKG
@@ -116,7 +107,7 @@ rm $PKG/usr/info/*.info-[1-3]
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
cp -a \
- AUTHORS AUTHOR-NOTES ChangeLog THANKS README NEWS INSTALL DISCUSSION-error-levels COPYING copyright.txt \
+ AUTHORS AUTHOR-NOTES ChangeLog THANKS README NEWS DISCUSSION-error-levels COPYING copyright.txt \
$PKG/usr/doc/$PRGNAM-$VERSION
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
diff --git a/academic/gri/gri.info b/academic/gri/gri.info
index 6e4ee42dde..df28f646ba 100644
--- a/academic/gri/gri.info
+++ b/academic/gri/gri.info
@@ -1,8 +1,8 @@
PRGNAM="gri"
-VERSION="2.12.23"
+VERSION="2.12.27"
HOMEPAGE="https://sourceforge.net/p/gri/wiki/Home/"
-DOWNLOAD="https://github.com/dankelley/gri/archive/v2.12.23/gri-2.12.23.tar.gz"
-MD5SUM="7594140fdd1ea1ccf890c2d7ede0e1e9"
+DOWNLOAD="https://sourceforge.net/projects/slackbuildsdirectlinks/files/gri/gri-2.12.27.tar.gz"
+MD5SUM="30579bafcfe274939c0c50cb9d66a7d0"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
diff --git a/academic/gri/texinfo-utf8.patch b/academic/gri/texinfo-utf8.patch
deleted file mode 100644
index b63573de33..0000000000
--- a/academic/gri/texinfo-utf8.patch
+++ /dev/null
@@ -1,12 +0,0 @@
-diff -Naur gri-2.12.23.orig/doc/gri.texi gri-2.12.23/doc/gri.texi
---- gri-2.12.23.orig/doc/gri.texi 2017-08-24 16:31:52.000000000 +0200
-+++ gri-2.12.23/doc/gri.texi 2019-10-22 15:39:51.666151000 +0200
-@@ -19277,7 +19277,7 @@
- Thomas Larsen,
- @cindex Thomas Larsen (contributor)
- @cindex contributor, Thomas Larsen
--Alejandro L�pez-Valencia,
-+Alejandro Lopez-Valencia,
- @cindex Alejandro Lopez-Valencia (contributor)
- @cindex contributor, Alejandro Lopez-Valencia
- Kawamura Masao, \ No newline at end of file
diff --git a/academic/gwyddion/gwyddion.SlackBuild b/academic/gwyddion/gwyddion.SlackBuild
index 5f741433c1..17c1854898 100644
--- a/academic/gwyddion/gwyddion.SlackBuild
+++ b/academic/gwyddion/gwyddion.SlackBuild
@@ -25,7 +25,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=gwyddion
-VERSION=${VERSION:-2.65}
+VERSION=${VERSION:-2.66}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
diff --git a/academic/gwyddion/gwyddion.info b/academic/gwyddion/gwyddion.info
index 6dc1a61df0..7c6e24d4fd 100644
--- a/academic/gwyddion/gwyddion.info
+++ b/academic/gwyddion/gwyddion.info
@@ -1,8 +1,8 @@
PRGNAM="gwyddion"
-VERSION="2.65"
+VERSION="2.66"
HOMEPAGE="http://gwyddion.net"
-DOWNLOAD="http://downloads.sourceforge.net/gwyddion/gwyddion-2.65.tar.xz"
-MD5SUM="6c55a05fe3040d6e102bd34d46d3da7d"
+DOWNLOAD="http://downloads.sourceforge.net/gwyddion/gwyddion-2.66.tar.xz"
+MD5SUM="5e6bcdd28687f6b88386686bb8e26d4f"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="gtkglext"
diff --git a/academic/magic/magic.SlackBuild b/academic/magic/magic.SlackBuild
index 73f7640cfc..241f4f9e2e 100644
--- a/academic/magic/magic.SlackBuild
+++ b/academic/magic/magic.SlackBuild
@@ -2,6 +2,8 @@
# Slackware build script for magic
# Written by Mauricio Martinez <eigenfilter {at} gmail [dot] com>
+#
+# Updated 05/01/2024 by Alfredo Tomasini <alto . tom @ gmail . com >
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
@@ -17,7 +19,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=magic
-VERSION=${VERSION:-8.0.211}
+VERSION=${VERSION:-8.3.474}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
@@ -30,9 +32,6 @@ if [ -z "$ARCH" ]; then
esac
fi
-# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
-# the name of the created package would be, and then exit. This information
-# could be useful to other scripts.
if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
exit 0
@@ -71,6 +70,18 @@ find -L . \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
+# change the final installation from /usr/lib to usr/lib64
+if [[ "$VERSION" =~ "8.3" ]] && [ "$ARCH" = "x86_64" ]
+then
+sed -i '
+/^ *INSTALL_LIBDIR *= /{
+s#.*##
+i\
+INSTALL_LIBDIR = @DIST_DIR@/lib64
+} ' scripts/defs.mak.in
+fi
+# exit
+
CFLAGS="$SLKCFLAGS" \
CXXFLAGS="$SLKCFLAGS" \
./configure \
@@ -88,8 +99,11 @@ make install DESTDIR=$PKG
find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
+mv $PKG/usr/share/man $PKG/usr/
find $PKG/usr/man -type f -exec gzip -9 {} \;
for i in $( find $PKG/usr/man -type l ) ; do ln -s $( readlink $i ).gz $i.gz ; rm $i ; done
+chmod -R 0644 $PKG/usr/man/*/*.gz
+rm -rf $PKG/usr/share
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
cp -a doc/* $PKG/usr/doc/$PRGNAM-$VERSION
diff --git a/academic/magic/magic.info b/academic/magic/magic.info
index 5dba84cc65..13a82a5f60 100644
--- a/academic/magic/magic.info
+++ b/academic/magic/magic.info
@@ -1,8 +1,8 @@
PRGNAM="magic"
-VERSION="8.0.211"
+VERSION="8.3.474"
HOMEPAGE="http://opencircuitdesign.com/magic/"
-DOWNLOAD="http://opencircuitdesign.com/magic/archive/magic-8.0.211.tgz"
-MD5SUM="caa066a415fe219afab7a80c5948ac49"
+DOWNLOAD="http://opencircuitdesign.com/magic/archive/magic-8.3.474.tgz"
+MD5SUM="6aabec0c7727f774af49bbb6abb2bdab"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
diff --git a/academic/molden/README b/academic/molden/README
new file mode 100644
index 0000000000..63d42559a9
--- /dev/null
+++ b/academic/molden/README
@@ -0,0 +1,29 @@
+MOLDEN a pre- and post processing program of molecular and electronic
+structure
+
+Molden is a package for displaying Molecular Density from the Ab Initio
+packages GAMESS-UK, GAMESS-US, GAUSSIAN, ADF, and the Semi-Empirical
+packages Mopac/Ampac, it also supports a number of other programs via
+the Molden Format. Molden reads all the required input information from
+the GAMESS / GAUSSIAN outputfile. Molden is capable of displaying
+Molecular Orbitals, the electron density and the Molecular minus atomic
+density.
+
+The SlackBuild seems to hang a bit before the build starts.
+This is normal.
+
+surf is renamed to molden-surf and docker is renamed to molden-docker to
+avoid conflict with other software called surf and docker.
+
+The unchanged copyright notice of the molden source code is:
+/***********************************************************************
+ Copyright (C) 1991 Gijs Schaftenaar
+
+ Permission to use, copy this software and its documentation
+ for private use is hereby granted to non profit organisations.
+
+ This software is provided "as is" without express or implied warranty.
+
+ Please cite the author in any work based on this material.
+
+ ***********************************************************************
diff --git a/academic/molden/molden.SlackBuild b/academic/molden/molden.SlackBuild
new file mode 100644
index 0000000000..a37cba7264
--- /dev/null
+++ b/academic/molden/molden.SlackBuild
@@ -0,0 +1,95 @@
+#!/bin/bash
+
+# Slackware build script for molden
+
+# Copyright 2024, Moritz R. Schäfer, Germany
+# All rights reserved.
+#
+# Redistribution and use of this script, with or without modification, is
+# permitted provided that the following conditions are met:
+#
+# 1. Redistributions of this script must retain the above copyright
+# notice, this list of conditions and the following disclaimer.
+#
+# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
+# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
+# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
+# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
+# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
+# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
+# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
+# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
+# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
+# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+cd $(dirname $0) ; CWD=$(pwd)
+
+PRGNAM=molden
+VERSION=${VERSION:-7.3}
+BUILD=${BUILD:-1}
+TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
+
+if [ -z "$ARCH" ]; then
+ case "$( uname -m )" in
+ i?86) ARCH=i586 ;;
+ arm*) ARCH=arm ;;
+ *) ARCH=$( uname -m ) ;;
+ esac
+fi
+
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
+TMP=${TMP:-/tmp/SBo}
+PKG=$TMP/package-$PRGNAM
+OUTPUT=${OUTPUT:-/tmp}
+
+set -e
+
+rm -rf $PKG
+mkdir -p $TMP $PKG $OUTPUT
+cd $TMP
+rm -rf $PRGNAM$VERSION
+
+tar xfz $CWD/$PRGNAM$VERSION.tar.gz
+cd $TMP/$PRGNAM$VERSION
+
+chown -R root:root .
+find -L . \
+ \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
+ -o -perm 511 \) -exec chmod 755 {} \; -o \
+ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
+ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
+
+# patch makefiles:
+sed -i 's/FC=\${FC}/FC="${FC}"/' makefile
+
+# make molden:
+make FC="gfortran -fallow-argument-mismatch" -j
+
+# install molden:
+cd bin
+mv surf molden-surf
+mv docker molden-docker
+mkdir -p $PKG/usr/bin
+install -s * $PKG/usr/bin
+
+# install docs:
+cd $TMP
+mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
+cp -a $PRGNAM$VERSION/HISTORY $PKG/usr/doc/$PRGNAM-$VERSION
+cp -a $PRGNAM$VERSION/README $PKG/usr/doc/$PRGNAM-$VERSION/README.molden
+cp -a $PRGNAM$VERSION/CopyRight $PKG/usr/doc/$PRGNAM-$VERSION
+cp -a $PRGNAM$VERSION/doc/* $PKG/usr/doc/$PRGNAM-$VERSION
+cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
+
+# Copy the slack-desc into ./install
+mkdir -p $PKG/install
+cat $CWD/slack-desc > $PKG/install/slack-desc
+
+# Make the package
+cd $PKG
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/molden/molden.info b/academic/molden/molden.info
new file mode 100644
index 0000000000..05ae829e6b
--- /dev/null
+++ b/academic/molden/molden.info
@@ -0,0 +1,10 @@
+PRGNAM="molden"
+VERSION="7.3"
+HOMEPAGE="https://www.theochem.ru.nl/molden"
+DOWNLOAD="UNSUPPORTED"
+MD5SUM=""
+DOWNLOAD_x86_64="https://ftp.science.ru.nl/Molden/molden7.3.tar.gz"
+MD5SUM_x86_64="c9726e52b8c52a86a2711ee9c8403cc8"
+REQUIRES=""
+MAINTAINER="Moritz R. Schäfer"
+EMAIL="moritzrichard dot schaefer at outlook dot de"
diff --git a/academic/molden/slack-desc b/academic/molden/slack-desc
new file mode 100644
index 0000000000..9ccd65b392
--- /dev/null
+++ b/academic/molden/slack-desc
@@ -0,0 +1,19 @@
+# HOW TO EDIT THIS FILE:
+# The "handy ruler" below makes it easier to edit a package description.
+# Line up the first '|' above the ':' following the base package name, and
+# the '|' on the right side marks the last column you can put a character in.
+# You must make exactly 11 lines for the formatting to be correct. It's also
+# customary to leave one space after the ':' except on otherwise blank lines.
+
+ |-----handy-ruler------------------------------------------------------|
+molden: molden (pre- and post processing of molecular & electronic structure)
+molden:
+molden: by G.Schaftenaar, Theoretical & Computational Chemistry group
+molden:
+molden: Molden is a package for displaying Molecular Density from the Ab
+molden: Initio packages GAMESS-UK, GAMESS-US, GAUSSIAN, ADF, and the Semi-
+molden: Empirical packages Mopac/Ampac, it also supports a number of other
+molden: programs via the Molden Format. Molden reads all the required input
+molden: information from the GAMESS / GAUSSIAN outputfile. Molden is capable
+molden: of displaying Molecular Orbitals, the electron density and the
+molden: Molecular minus atomic density.
diff --git a/academic/nco/nco.SlackBuild b/academic/nco/nco.SlackBuild
index 202f45a72e..706e1316ed 100644
--- a/academic/nco/nco.SlackBuild
+++ b/academic/nco/nco.SlackBuild
@@ -26,7 +26,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=nco
-VERSION=${VERSION:-5.2.2}
+VERSION=${VERSION:-5.2.4}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
diff --git a/academic/nco/nco.info b/academic/nco/nco.info
index a532879aeb..b6064e2b16 100644
--- a/academic/nco/nco.info
+++ b/academic/nco/nco.info
@@ -1,8 +1,8 @@
PRGNAM="nco"
-VERSION="5.2.2"
+VERSION="5.2.4"
HOMEPAGE="http://nco.sf.net"
-DOWNLOAD="https://github.com/nco/nco/archive/5.2.2/nco-5.2.2.tar.gz"
-MD5SUM="5baea71f85e0344cc1d74244ac8441b6"
+DOWNLOAD="https://github.com/nco/nco/archive/5.2.4/nco-5.2.4.tar.gz"
+MD5SUM="b46ed9dcdc1a2c857811cb5698a0460c"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="netcdf udunits antlr2"
diff --git a/academic/openboard/openboard.SlackBuild b/academic/openboard/openboard.SlackBuild
index d244896916..46af39058c 100644
--- a/academic/openboard/openboard.SlackBuild
+++ b/academic/openboard/openboard.SlackBuild
@@ -26,7 +26,7 @@ cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=openboard
SRCNAM=OpenBoard
-VERSION=${VERSION:-1.7.0}
+VERSION=${VERSION:-1.7.1}
SRCVER=$(echo $VERSION | tr _ -)
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
diff --git a/academic/openboard/openboard.info b/academic/openboard/openboard.info
index 20a8614784..a21a6369a0 100644
--- a/academic/openboard/openboard.info
+++ b/academic/openboard/openboard.info
@@ -1,8 +1,8 @@
PRGNAM="openboard"
-VERSION="1.7.0"
+VERSION="1.7.1"
HOMEPAGE="https://github.com/OpenBoard-org/OpenBoard/"
-DOWNLOAD="https://github.com/OpenBoard-org/OpenBoard/archive/v1.7.0/OpenBoard-1.7.0.tar.gz"
-MD5SUM="8e4b9780efffbd1adca5582fa161fd7e"
+DOWNLOAD="https://github.com/OpenBoard-org/OpenBoard/archive/v1.7.1/OpenBoard-1.7.1.tar.gz"
+MD5SUM="338d19d5fd281bf3c9a3bdfa51c2d241"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="libpaper libass x264 libfdk-aac"
diff --git a/academic/plus42/plus42.SlackBuild b/academic/plus42/plus42.SlackBuild
index c89279a774..b62088c801 100644
--- a/academic/plus42/plus42.SlackBuild
+++ b/academic/plus42/plus42.SlackBuild
@@ -26,7 +26,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=plus42
-VERSION=${VERSION:-1.1.9}
+VERSION=${VERSION:-1.1.12}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
diff --git a/academic/plus42/plus42.info b/academic/plus42/plus42.info
index 45e08e71d5..f0753017db 100644
--- a/academic/plus42/plus42.info
+++ b/academic/plus42/plus42.info
@@ -1,8 +1,8 @@
PRGNAM="plus42"
-VERSION="1.1.9"
+VERSION="1.1.12"
HOMEPAGE="https://www.thomasokken.com/plus42"
-DOWNLOAD="https://github.com/thomasokken/plus42desktop/archive/v1.1.9/plus42-1.1.9.tar.gz"
-MD5SUM="a06f497124bc6b0e03d2f46c15097faa"
+DOWNLOAD="https://github.com/thomasokken/plus42desktop/archive/v1.1.12/plus42-1.1.12.tar.gz"
+MD5SUM="c499e67219124e0da564aa8740ac276f"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
diff --git a/academic/pspp/pspp.SlackBuild b/academic/pspp/pspp.SlackBuild
index 17b31eb664..efd42d80ce 100644
--- a/academic/pspp/pspp.SlackBuild
+++ b/academic/pspp/pspp.SlackBuild
@@ -25,7 +25,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=pspp
-VERSION=${VERSION:-2.0.0}
+VERSION=${VERSION:-2.0.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
diff --git a/academic/pspp/pspp.info b/academic/pspp/pspp.info
index 702e496e28..7c293f4bc2 100644
--- a/academic/pspp/pspp.info
+++ b/academic/pspp/pspp.info
@@ -1,8 +1,8 @@
PRGNAM="pspp"
-VERSION="2.0.0"
+VERSION="2.0.1"
HOMEPAGE="http://www.gnu.org/software/pspp/"
-DOWNLOAD="http://mirrors.nav.ro/gnu/pspp/pspp-2.0.0.tar.gz"
-MD5SUM="11f5949311bfe66a44999b9d7db6c99b"
+DOWNLOAD="http://mirrors.nav.ro/gnu/pspp/pspp-2.0.1.tar.gz"
+MD5SUM="0933860d7d511dac67277ef4829263ce"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="spread-sheet-widget"
diff --git a/academic/samtools/samtools.SlackBuild b/academic/samtools/samtools.SlackBuild
index 7efbaf3288..4f39dce0d0 100644
--- a/academic/samtools/samtools.SlackBuild
+++ b/academic/samtools/samtools.SlackBuild
@@ -25,14 +25,14 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=samtools
-VERSION=${VERSION:-1.19.2}
-HTSLIBV=${HTSLIBV:-1.19.1}
+VERSION=${VERSION:-1.20}
+HTSLIBV=${HTSLIBV:-1.20}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
-# Some applications still rely on the legacy samtools API instead of using htslib
-# exclusively, in that case, install the headers in /usr/include/bam and the static
+# Some applications still rely on the legacy samtools API instead of using htslib
+# exclusively, in that case, install the headers in /usr/include/bam and the static
# libbam library as well by declaring (uncommenting):
#SAMLIB="yes"
# and commenting out:
@@ -122,9 +122,7 @@ find $PKG/usr/man -type f -exec gzip -9 {} \;
for i in $( find $PKG/usr/man -type l ) ; do ln -s $( readlink $i ).gz $i.gz ; rm $i ; done
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
-cp -a \
- AUTHORS LICENSE README NEWS.md examples \
- $PKG/usr/doc/$PRGNAM-$VERSION
+cp -a AUTHORS LICENSE README NEWS.md examples $PKG/usr/doc/$PRGNAM-$VERSION
cp $CWD/README $PKG/usr/doc/$PRGNAM-$VERSION
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
diff --git a/academic/samtools/samtools.info b/academic/samtools/samtools.info
index eef9473b1e..40df7ba546 100644
--- a/academic/samtools/samtools.info
+++ b/academic/samtools/samtools.info
@@ -1,8 +1,8 @@
PRGNAM="samtools"
-VERSION="1.19.2"
+VERSION="1.20"
HOMEPAGE="http://www.htslib.org"
-DOWNLOAD="https://github.com/samtools/samtools/releases/download/1.19.2/samtools-1.19.2.tar.bz2"
-MD5SUM="318492d95f5d8cef697442d1be996b77"
+DOWNLOAD="https://github.com/samtools/samtools/releases/download/1.20/samtools-1.20.tar.bz2"
+MD5SUM="e33f429b57324a55e5cbe0ef9f3a094e"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="htslib"
diff --git a/academic/smath-studio/smath-studio.SlackBuild b/academic/smath-studio/smath-studio.SlackBuild
index 4b26c719c3..e6b4740429 100644
--- a/academic/smath-studio/smath-studio.SlackBuild
+++ b/academic/smath-studio/smath-studio.SlackBuild
@@ -25,7 +25,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=smath-studio
-VERSION=${VERSION:-1.0.8348}
+VERSION=${VERSION:-1.1.8763}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
diff --git a/academic/smath-studio/smath-studio.desktop b/academic/smath-studio/smath-studio.desktop
index 6b41e1fe8d..2af6903742 100644
--- a/academic/smath-studio/smath-studio.desktop
+++ b/academic/smath-studio/smath-studio.desktop
@@ -7,5 +7,5 @@ GenericName=Computer algebra system
Comment=Symbolic computation software
Icon=smath-studio
Exec=smath-studio
-Categories=Education;
+Categories=Science;Education;Math
MimeType=
diff --git a/academic/smath-studio/smath-studio.info b/academic/smath-studio/smath-studio.info
index bc40d92965..c10558c6b9 100644
--- a/academic/smath-studio/smath-studio.info
+++ b/academic/smath-studio/smath-studio.info
@@ -1,9 +1,9 @@
PRGNAM="smath-studio"
-VERSION="1.0.8348"
+VERSION="1.1.8763"
HOMEPAGE="https://smath.info"
-DOWNLOAD="https://smath.com/file/Lw2xA/SMathStudioDesktop.1_0_8348.Mono.tar.gz \
+DOWNLOAD="https://smath.info/en-US/files/Download/w3XHB/SMathStudioDesktop.1_1_8763.Mono.tar.gz \
http://ponce.cc/slackware/sources/repo/SMathStudio.Icons.zip"
-MD5SUM="4ae9109f910c0085eeb8c193f3ad1c10 \
+MD5SUM="0e3c05eb81a82dbcce2ef04904624b2b \
1dd3ff0477b5c3c57fb815320a387643"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
diff --git a/academic/stellarsolver/stellarsolver.info b/academic/stellarsolver/stellarsolver.info
index e9d567c16f..106ea0e7ce 100644
--- a/academic/stellarsolver/stellarsolver.info
+++ b/academic/stellarsolver/stellarsolver.info
@@ -1,10 +1,10 @@
PRGNAM="stellarsolver"
VERSION="2.4"
HOMEPAGE="https://github.com/rlancaste/stellarsolver"
-DOWNLOAD="https://github.com/rlancaste/stellarsolver/archive/2.4/stellarsolver-2.4.tar.gz"
-MD5SUM="a4a92e7c2dc296d7fcbc814134d45886"
-DOWNLOAD_x86_64=""
-MD5SUM_x86_64=""
+DOWNLOAD="UNSUPPORTED"
+MD5SUM=""
+DOWNLOAD_x86_64="https://github.com/rlancaste/stellarsolver/archive/2.4/stellarsolver-2.4.tar.gz"
+MD5SUM_x86_64="a4a92e7c2dc296d7fcbc814134d45886"
REQUIRES="wcslib"
MAINTAINER="Edward W. Koenig"
EMAIL="kingbeowulf@linuxgalaxy.org"
diff --git a/academic/xsimd/xsimd.SlackBuild b/academic/xsimd/xsimd.SlackBuild
index f15fa4eb2b..e98f2b53c2 100644
--- a/academic/xsimd/xsimd.SlackBuild
+++ b/academic/xsimd/xsimd.SlackBuild
@@ -3,7 +3,7 @@
# Slackware build script for xsimd
# Copyright 2022-2023 Isaac Yu <isaacyu@protonmail.com>
-# Copyright 2023 Jeremy Hansen <jebrhansen+SBo@gmail.com>
+# Copyright 2023-2024 Jeremy Hansen <jebrhansen+SBo@gmail.com>
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -26,7 +26,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=xsimd
-VERSION=${VERSION:-11.1.0}
+VERSION=${VERSION:-13.0.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
diff --git a/academic/xsimd/xsimd.info b/academic/xsimd/xsimd.info
index 8a24d36307..845f56a2e5 100644
--- a/academic/xsimd/xsimd.info
+++ b/academic/xsimd/xsimd.info
@@ -1,8 +1,8 @@
PRGNAM="xsimd"
-VERSION="11.1.0"
+VERSION="13.0.0"
HOMEPAGE="https://github.com/QuantStack/xsimd"
-DOWNLOAD="https://github.com/QuantStack/xsimd/archive/11.1.0/xsimd-11.1.0.tar.gz"
-MD5SUM="29ffd841d6491fddfbfaedeffc637f02"
+DOWNLOAD="https://github.com/QuantStack/xsimd/archive/13.0.0/xsimd-13.0.0.tar.gz"
+MD5SUM="c661deb91836e82d3070f81032014fe6"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="doctest"