diff options
Diffstat (limited to 'academic/hyphy')
| -rw-r--r-- | academic/hyphy/README | 4 | ||||
| -rw-r--r-- | academic/hyphy/hyphy.SlackBuild | 9 | ||||
| -rw-r--r-- | academic/hyphy/hyphy.info | 6 |
3 files changed, 10 insertions, 9 deletions
diff --git a/academic/hyphy/README b/academic/hyphy/README index 4405702da1..2aca901dff 100644 --- a/academic/hyphy/README +++ b/academic/hyphy/README @@ -51,6 +51,10 @@ NOTE! The script builds two executables: HYPHYMP, which uses pthreads to do multiprocessing and HYPHYMPI, which uses openmpi (hence the dependency). +HyPhy Vision +To visualise your results produced offline, you can use HyPhy Vision: +http://vision.hyphy.org/ + Citing Sergei L. Kosakovsky Pond, Simon D. W. Frost and Spencer V. Muse (2005) HyPhy: hypothesis testing using phylogenies. diff --git a/academic/hyphy/hyphy.SlackBuild b/academic/hyphy/hyphy.SlackBuild index 954ebd08dd..aa4484c239 100644 --- a/academic/hyphy/hyphy.SlackBuild +++ b/academic/hyphy/hyphy.SlackBuild @@ -2,7 +2,7 @@ # Slackware build script for hyphy -# Copyright 2017-2021 Petar Petrov slackalaxy@gmail.com +# Copyright 2017-2023 Petar Petrov slackalaxy@gmail.com # All rights reserved. # # Redistribution and use of this script, with or without modification, is @@ -25,7 +25,7 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=hyphy -VERSION=${VERSION:-2.5.31} +VERSION=${VERSION:-2.5.50} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} @@ -100,10 +100,7 @@ cd build -DCMAKE_INSTALL_PREFIX=/usr \ -DCMAKE_BUILD_TYPE=Release .. -# It is actually not necessary anymore to specify here MP and HYPHYMPI, -# as 'make' alone will attempt to build them both. However, let's leave -# them, just in case. - make MP HYPHYMPI + make HYPHYMPI make install DESTDIR=$PKG cd .. diff --git a/academic/hyphy/hyphy.info b/academic/hyphy/hyphy.info index 440a4e7e1d..b35f93b3bb 100644 --- a/academic/hyphy/hyphy.info +++ b/academic/hyphy/hyphy.info @@ -1,8 +1,8 @@ PRGNAM="hyphy" -VERSION="2.5.31" +VERSION="2.5.50" HOMEPAGE="https://veg.github.io/hyphy-site/" -DOWNLOAD="https://github.com/veg/hyphy/archive/2.5.31/hyphy-2.5.31.tar.gz" -MD5SUM="f4d6e48aa47b657810e29dacf183860b" +DOWNLOAD="https://github.com/veg/hyphy/archive/2.5.50/hyphy-2.5.50.tar.gz" +MD5SUM="c4e02d58025f4d1f129cc2b0c2dc97dd" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="openmpi" |