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2020-01-12academic/ncbi-blast+: Updated for version 2.10.0. Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/MetaPhlAn2: Updated for version 2.9.5.3. Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/wehi-weasel: Updated for version 3.6.0.18. Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/fiji: Updated for version 20191216_2110. Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/TreeGraph: Updated for version 2.15.0_887_beta. Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/FCSalyzer: Updated for version 0.9.18_alpha. Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/HMMER: Updated for version 3.3. Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/PhyML: Updated for version 3.3.20190909. Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/meme-suite: Updated for version 5.1.0. Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/meme-db-gomo: Added (MEME Suite GOMo databases) Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/meme-db-motif: Added (MEME Suite motif databases) Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/meme-db-tgene: Added (MEME Suite T-gene databases) Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/spades: Updated for version 3.14.0. Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/t_coffee: Updated for version 13.41.0_git28bdc39. Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/cistrome-MACS: updated homepage and misc cleanups Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/cistrome-CEAS: updated download link and misc cleanups Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/io_lib: Updated for version 1.14.11. Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/mafft: Updated for version 7.453. Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/megax: Updated for version 10.1.6_1. Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/diamond: Updated for version 0.9.29. Petar Petrov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-12academic/equalx: Add .desktop and patch B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-12academic/pcalc: Remove empty doinst.sh. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-12academic/meep: Make sbolint happy. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-12academic/trimmomatic: Remove template comment from script. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-12academic/suitesparse: Remove template comment from script. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-12academic/stringtie: Remove template comment from script. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-12academic/meep: Fix slack-desc. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-12academic/latex2html: Fix slack-desc. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-12academic/bcftools: Remove template comment from script. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-12academic/cvc4: Fix slack-desc. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-12academic/ViennaRNA: Fix slack-desc. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-12academic/SU2: Fix slack-desc. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-12academic/ITK: Fix slack-desc. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-12academic/treerecs: Added (a tree reconciliation tool). Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2020-01-12academic/seaview: Updated for version 5.0. Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2020-01-12academic/eprover: Updated for version 2.4. Nick Smallbone
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2020-01-12academic/z3: Updated for version 4.8.7. Nick Smallbone
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2020-01-12academic/qucs: Updated for version 0.0.19. Fellype do Nascimento
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2020-01-11academic/FreeFem: Updated for version 4.4.3. Fellype do Nascimento
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2020-01-11academic/treebest-ensembl: Added (Tree Building). Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2020-01-11academic/ugene: Updated for version 33. Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2020-01-07academic/treeviewx: Updated for version 1.18.4.2171_ac2afe5f8. Kevin Matthew
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2020-01-03academic/reduce-algebra: Updated for version 20200101svn5241. Alexander Verbovetsky
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2020-01-03academic/gnucap: Fix VERSION in script. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-03academic/zotero: Fix .info. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-03academic/pari: Fix .info. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-03academic/copasi: Fix .info. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com>
2020-01-03academic/tabix-legacy: Fixed PRGNAM in build script. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-03academic/samtools-legacy: Fixed PRGNAM in build script. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-03academic/jellyfish_k-mer: Fixed PRGNAM in build script. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-03academic/clark-ugene: Fixed PRGNAM in build script. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-03academic/bowtie2-legacy: Fixed PRGNAM in build script. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-03academic/equalx: New maintainer, various fixes. B. Watson
Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-03academic/pcalc: Added (cli util for hex/dec/oct/bin math) Charles Daniels
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-03academic/bcftools: Updated for version 1.10.2. Rob van Nues
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-03academic/samtools: Updated for version 1.10. Rob van Nues
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-03academic/grace: Updated for version 5.1.25 (+ new maintainer) Fellype do Nascimento
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-03academic/gcalctool: Assume maintainership Johannes Schoepfer
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2020-01-03academic/qtoctave: Removed. Dead upstream and no longer needed. Robby Workman
octave has its own gui now, in addition to this project being dead upstream (homepage is gone). Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2019-12-29academic/cadabra2: Updated for version 2.2.8. Alexander Verbovetsky
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-12-28academic/R: Updated for version 3.6.2. Andrew Payne
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-12-28academic/fet: Updated for version 5.42.1. R.S.Ananda Murthy
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-12-28academic/bibletime: Updated for version 3.0_beta2. Tim Dickson
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-12-21academic/ITK: Add support for GCC 9. Benjamin Trigona-Harany
2019-12-19academic/scidavis: Updated for version 1.26. Fellype do Nascimento
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-12-15academic/meep: Added (electromagnetics simulation using FDTD). PaulKinsler
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-12-15academic/bibletime: Updated for version 3.0_beta1. Tim Dickson
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-12-07academic/fet: Updated for version 5.41.0. R.S.Ananda Murthy
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-11-23academic/ITK: Update download link. Benjamin Trigona-Harany
2019-11-23academic/Shark: Updated for version 4.0.0. Benjamin Trigona-Harany
2019-11-16academic/gwyddion: Updated for version 2.55. Daniil Bratashov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-11-16academic/klavaro: Updated for version 3.03. Johannes Schoepfer
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-11-03academic/ngspice: Fix Download. Willy Sudiarto Raharjo
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-11-01academic/ngspice: Updated for version 31. R. S. Ananda Murthy
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-11-01academic/veusz: Updated for version 3.1. Fellype do Nascimento
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-10-26academic/pyCRAC: Updated for version 1.4.6. Rob van Nues
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-10-26academic/gri: Updated for version 2.0.1. Vincent Batts
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-10-19academic/STAR: Updated for version 2.7.3a. Rob van Nues
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-10-05academic/copasi: Updated for version 4.26.213. Pedro Mendes
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-09-21academic/qalculate-gtk: Updated for version 3.4.0 Larry Hajali
Signed-off-by: Larry Hajali <larryhaja[at]gmail[dot]com>
2019-09-21academic/libqalculate: Updated for version 3.4.0 Larry Hajali
Signed-off-by: Larry Hajali <larryhaja[at]gmail[dot]com>
2019-09-21academic/FreeFem: Added (non-linear multiphysics software). Fellype do Nascimento
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-09-21academic/reduce-algebra: Updated for version 20190915svn5129. Alexander Verbovetsky
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-09-14academic/Gridcoin-Research: Updated for version 4.0.5.0. Edward W. Koenig
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-09-13academic/zotero: Updated for version 5.0.73. Andrew Payne
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-09-13academic/gwyddion: Updated for version 2.54. Daniil Bratashov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-09-08academic/ViennaRNA: Updated for version 2.4.14. Rob van Nues
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-09-08academic/locarna: Updated for version 1.9.2.3. Rob van Nues
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-09-08academic/STAR: Updated for version 2.7.2b. Rob van Nues
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-08-17academic/zotero: Updated for version 5.0.73. Andrew Payne
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-08-17academic/gspiceui: Updated for version 1.2.36. R. S. Ananda Murthy
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-08-10academic/scidavis: Add patches. Fellype do Nascimento
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-08-09academic/abella: Added (interactive theorem prover). Jefferson Rocha
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-08-09academic/R: Updated for version 3.6.1. Andrew Payne
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-08-03academic/diamond: Updated for version 0.9.25. Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-08-03academic/cadabra2: Updated for version 2.2.7_d81535e. Alexander Verbovetsky
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-08-03academic/tophat: Updated for version 2.1.2. Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-08-03academic/t_coffee: Updated for version 13.00_git33cdeb8. Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-08-03academic/copasi: Updated for version 4.26.213. Pedro Mendes
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-08-03academic/stringtie: Updated for version 1.3.6. Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>