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2019-01-0520190105.1 global branch merge.current-20190105.1 Matteo Bernardini
2019-01-05academic/octave: Updated for version 4.4.1. Kyle Guinn
2019-01-05academic/arpack-ng: Updated for version 3.6.3. Kyle Guinn
2019-01-05academic/qrupdate: Update URLs and patches. Kyle Guinn
2019-01-05academic/spqr: Updated for version 2.0.9. Kyle Guinn
2019-01-05academic/umfpack: Updated for version 5.7.8. Kyle Guinn
2019-01-05academic/klu: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/cholmod: Updated for version 3.0.13. Kyle Guinn
2019-01-05academic/rbio: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/btf: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/ldl: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/cxsparse: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/csparse: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/ccolamd: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/colamd: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/camd: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/amd: Updated for SuiteSparse 5.4.0. Kyle Guinn
2019-01-05academic/suitesparseconfig: Updated for version 5.4.0. Kyle Guinn
2019-01-05academic/pari: Updated for version 2.11.1. Joachim Kruth
2019-01-05academic/samtools: Updated for version 1.9 + new maintainer. Rob van Nues
2019-01-05academic/bcftools: Added (BCF calling tools). Rob van Nues
2019-01-05academic/bowtie2: Updated for version 2.3.4.3 + new maintainer. Rob van Nues
2019-01-05academic/ngspice: Updated for version 29. R. S. Ananda Murthy
2018-12-25academic/cryptominisat: Fix MD5SUM. Willy Sudiarto Raharjo
2018-12-24academic/kraken: Added (Assigning Taxonomic Labels). Petar Petrov
2018-12-24academic/jellyfish_k-mer: Added (k-mers counting tools). Petar Petrov
2018-12-24academic/ugene: Updated for version 1.31.1. Petar Petrov
2018-12-24academic/trimmomatic: Added (Trimming Tool). Petar Petrov
2018-12-24academic/ncbi-rmblastn: Update DEP. Petar Petrov
2018-12-24academic/ncbi-blast-plus: Removed (Use ncbi-blast+). Willy Sudiarto Raharjo
2018-12-24academic/ImageJ: Removed (Use fiji). Willy Sudiarto Raharjo
2018-12-24academic/ij-plugins-UCSD: Removed (Use fiji). Willy Sudiarto Raharjo
2018-12-24academic/ij-plugins-LOCI: Removed (Use fiji). Willy Sudiarto Raharjo
2018-12-24academic/fiji: Added (ImageJ Distribution). Petar Petrov
2018-12-24academic/wehi-weasel: Updated for version 3.5.0.17. Petar Petrov
2018-12-24academic/vcftools: Updated for version 0.1.16. Petar Petrov
2018-12-24academic/hyphy: Updated for version 2.3.14. Petar Petrov
2018-12-24academic/stringtie: Added (Assembler of RNA-Seq alignments). Petar Petrov
2018-12-24academic/tabix-legacy: Added (Generic indexer). Petar Petrov
2018-12-24academic/spades: Updated for version 3.13.0. Petar Petrov
2018-12-24academic/samtools-legacy: Added (Sequence Alignment/Map Tools). Petar Petrov
2018-12-24academic/ncbi-blast+: Added (BLAST+ Command Line Applications). Petar Petrov
2018-12-24academic/ncbi-blast: Update script. Petar Petrov
2018-12-24academic/megax: Updated for version 10.0.5_1. Petar Petrov
2018-12-24academic/mafft: Updated for version 7.407. Petar Petrov
2018-12-24academic/diamond: Added (A sequence aligner). Petar Petrov
2018-12-24academic/clark-ugene: Added (supervised sequence classification). Petar Petrov
2018-12-24academic/bppsuite: Updated for version 2.4.1. Petar Petrov
2018-12-24academic/bpp-seq-omics: Updated for version 2.4.1. Petar Petrov
2018-12-24academic/bpp-seq: Updated for version 2.4.1. Petar Petrov
2018-12-24academic/bpp-popgen: Updated for version 2.4.1. Petar Petrov
2018-12-24academic/bpp-phyl-omics: Updated for version 2.4.1. Petar Petrov
2018-12-24academic/bpp-phyl: Updated for version 2.4.1. Petar Petrov
2018-12-24academic/bpp-core: Updated for version 2.4.1. Petar Petrov
2018-12-24academic/bowtie2-legacy: Added (aligning sequencing reads). Petar Petrov
2018-12-24academic/archaeopteryx: Updated for version 0.9928b. Petar Petrov
2018-12-24academic/aliview: Updated for version 1.25. Petar Petrov
2018-12-24academic/RepeatMasker: Updated for version 4.0.8. Petar Petrov
2018-12-24academic/FCSalyzer: Updated for version 0.9.16_alpha. Petar Petrov
2018-12-24academic/WEVOTE: Added (WEighted VOting Taxonomic idEntification). Petar Petrov
2018-12-22academic/boinc: Updated for version 7.14.2. Edward W. Koenig
2018-12-22academic/cryptominisat: Updated for version 5.6.6. Alan Aversa
2018-12-22academic/fastqc: Updated for version 0.11.8 + new maintainer. Rob van Nues
2018-12-16academic/pulseview: Updated for version 0.4.1. Andrzej Telszewski
2018-12-16academic/sigrok-cli: Updated for version 0.7.1. Andrzej Telszewski
2018-12-15academic/Gridcoin-Research: Updated for version 4.0.1.0. Edward W. Koenig
2018-12-10academic/zotero: Updated for version 5.0.58 + new maintainer. Andrew Payne
2018-12-09academic/qalculate-gtk: Updated for version 2.8.2 Larry Hajali
2018-12-09academic/libqalculate: Updated for version 2.8.2 Larry Hajali
2018-12-01academic/calc: Update to 2.12.7.2 Dave Woodfall
2018-12-01academic/novocraft: Updated for version 3.09.01. Rob van Nues
2018-12-01academic/pyCRAC: Updated for version 1.3.3. rob van nues
2018-12-01academic/pysam: Updated for version 0.15.1. Rob van Nues
2018-12-01academic/isoelectric-point: Update homepage and download. David Spencer
2018-12-01academic/pyfits: Update homepage. David Spencer
2018-11-27academic/pspp: Updated for version 1.2.0. Vitor Borrego
2018-11-24academic/STAR: Updated for version 2.6.1d. Rob van Nues
2018-11-24academic/qalculate-gtk: Updated for version 2.8.1 Larry Hajali
2018-11-24academic/libqalculate: Updated for version 2.8.1 Larry Hajali
2018-11-24academic/gwyddion: Updated for version 2.52. Daniil Bratashov
2018-11-17academic/boinc: Switch homepage to https. David Spencer
2018-11-10academic/calc: Update to 2.12.7.0 David Woodfall
2018-11-10academic/units: Updated for version 2.18. ArTourter
2018-11-03academic/aenig4: Updated for version 1.04. Jorge Giner
2018-11-03academic/kiwisolver: Added (Cassowary algorithm). Serban Udrea
2018-10-21academic/Gridcoin-Research: Updated for version 4.0.0.0. Edward W. Koenig
2018-10-21academic/STAR: Updated for version 2.6.1c. Rob van Nues
2018-10-21academic/engauge: Updated for version 10.10. Pedro Mendes
2018-10-06academic/ladr: Switch homepage and download to https. David Spencer
2018-10-06academic/wxMaxima: Switch homepage to https. David Spencer
2018-09-29academic/gpredict: Updated for version 2.2.1 + new maintainer. Yth - Arnaud
2018-09-23academic/veusz: Fix build against new Qt5. Willy Sudiarto Raharjo
2018-09-21academic/reduce-algebra: Updated for version 20180920svn4765. Alexander Verbovetsky
2018-09-15academic/wmcalc: Updated for version 0.7. B. Watson
2018-09-15academic/sage-bin: Added (python based mathematics software). Duncan Roe
2018-09-14academic/cryptominisat: Added (SAT solver). Alan Aversa
2018-09-08academic/ITK: Updated for version 4.13.1. Benjamin Trigona-Harany
2018-09-08academic/Gridcoin-Research: Updated for version 3.7.16.0. Edward W. Koenig
2018-09-01academic/Gridcoin-Research: Added (rewards for boinc). Edward W. Koenig
2018-09-01academic/STAR: Updated for version 2.6.1a. Rob van Nues