diff options
Diffstat (limited to 'academic')
33 files changed, 163 insertions, 315 deletions
diff --git a/academic/Gridcoin-Research/Gridcoin-Research.SlackBuild b/academic/Gridcoin-Research/Gridcoin-Research.SlackBuild index 73603623be..354a1e7e40 100644 --- a/academic/Gridcoin-Research/Gridcoin-Research.SlackBuild +++ b/academic/Gridcoin-Research/Gridcoin-Research.SlackBuild @@ -70,6 +70,12 @@ find -L . \ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; +# For boost >= 1.73.0 +patch -p1 < $CWD/boost-1.73.patch + +# For qt-5.15.x, thanks to kingbeowulf! +sed -i '/^#include <QPainter>$/a #include <QPainterPath>' src/qt/trafficgraphwidget.cpp + if [ "${QRENC:-no}" = "yes" ]; then useqr="--with-qrencode" else diff --git a/academic/Gridcoin-Research/boost-1.73.patch b/academic/Gridcoin-Research/boost-1.73.patch new file mode 100644 index 0000000000..d47fe78a6e --- /dev/null +++ b/academic/Gridcoin-Research/boost-1.73.patch @@ -0,0 +1,54 @@ +diff -Naur Gridcoin-Research-4.0.6.0.orig/src/qt/clientmodel.cpp Gridcoin-Research-4.0.6.0/src/qt/clientmodel.cpp +--- Gridcoin-Research-4.0.6.0.orig/src/qt/clientmodel.cpp 2019-10-22 20:36:49.000000000 +0200 ++++ Gridcoin-Research-4.0.6.0/src/qt/clientmodel.cpp 2020-05-12 08:45:16.926818550 +0200 +@@ -270,9 +270,9 @@ + // Connect signals to client + uiInterface.NotifyBlocksChanged.connect(boost::bind(NotifyBlocksChanged, this)); + uiInterface.BannedListChanged.connect(boost::bind(BannedListChanged, this)); +- uiInterface.NotifyNumConnectionsChanged.connect(boost::bind(NotifyNumConnectionsChanged, this, _1)); +- uiInterface.NotifyAlertChanged.connect(boost::bind(NotifyAlertChanged, this, _1, _2)); +- uiInterface.NotifyScraperEvent.connect(boost::bind(NotifyScraperEvent, this, _1, _2, _3)); ++ uiInterface.NotifyNumConnectionsChanged.connect(boost::bind(NotifyNumConnectionsChanged, this, boost::placeholders::_1)); ++ uiInterface.NotifyAlertChanged.connect(boost::bind(NotifyAlertChanged, this, boost::placeholders::_1, boost::placeholders::_2)); ++ uiInterface.NotifyScraperEvent.connect(boost::bind(NotifyScraperEvent, this, boost::placeholders::_1, boost::placeholders::_2, boost::placeholders::_3)); + } + + void ClientModel::unsubscribeFromCoreSignals() +@@ -280,7 +280,7 @@ + // Disconnect signals from client + uiInterface.NotifyBlocksChanged.disconnect(boost::bind(NotifyBlocksChanged, this)); + uiInterface.BannedListChanged.disconnect(boost::bind(BannedListChanged, this)); +- uiInterface.NotifyNumConnectionsChanged.disconnect(boost::bind(NotifyNumConnectionsChanged, this, _1)); +- uiInterface.NotifyAlertChanged.disconnect(boost::bind(NotifyAlertChanged, this, _1, _2)); +- uiInterface.NotifyScraperEvent.disconnect(boost::bind(NotifyScraperEvent, this, _1, _2, _3)); ++ uiInterface.NotifyNumConnectionsChanged.disconnect(boost::bind(NotifyNumConnectionsChanged, this, boost::placeholders::_1)); ++ uiInterface.NotifyAlertChanged.disconnect(boost::bind(NotifyAlertChanged, this, boost::placeholders::_1, boost::placeholders::_2)); ++ uiInterface.NotifyScraperEvent.disconnect(boost::bind(NotifyScraperEvent, this, boost::placeholders::_1, boost::placeholders::_2, boost::placeholders::_3)); + } +diff -Naur Gridcoin-Research-4.0.6.0.orig/src/qt/walletmodel.cpp Gridcoin-Research-4.0.6.0/src/qt/walletmodel.cpp +--- Gridcoin-Research-4.0.6.0.orig/src/qt/walletmodel.cpp 2019-10-22 20:36:49.000000000 +0200 ++++ Gridcoin-Research-4.0.6.0/src/qt/walletmodel.cpp 2020-05-12 08:47:46.494818550 +0200 +@@ -369,17 +369,17 @@ + void WalletModel::subscribeToCoreSignals() + { + // Connect signals to wallet +- wallet->NotifyStatusChanged.connect(boost::bind(&NotifyKeyStoreStatusChanged, this, _1)); +- wallet->NotifyAddressBookChanged.connect(boost::bind(NotifyAddressBookChanged, this, _1, _2, _3, _4, _5)); +- wallet->NotifyTransactionChanged.connect(boost::bind(NotifyTransactionChanged, this, _1, _2, _3)); ++ wallet->NotifyStatusChanged.connect(boost::bind(&NotifyKeyStoreStatusChanged, this, boost::placeholders::_1)); ++ wallet->NotifyAddressBookChanged.connect(boost::bind(NotifyAddressBookChanged, this, boost::placeholders::_1, boost::placeholders::_2, boost::placeholders::_3, boost::placeholders::_4, boost::placeholders::_5)); ++ wallet->NotifyTransactionChanged.connect(boost::bind(NotifyTransactionChanged, this, boost::placeholders::_1, boost::placeholders::_2, boost::placeholders::_3)); + } + + void WalletModel::unsubscribeFromCoreSignals() + { + // Disconnect signals from wallet +- wallet->NotifyStatusChanged.disconnect(boost::bind(&NotifyKeyStoreStatusChanged, this, _1)); +- wallet->NotifyAddressBookChanged.disconnect(boost::bind(NotifyAddressBookChanged, this, _1, _2, _3, _4, _5)); +- wallet->NotifyTransactionChanged.disconnect(boost::bind(NotifyTransactionChanged, this, _1, _2, _3)); ++ wallet->NotifyStatusChanged.disconnect(boost::bind(&NotifyKeyStoreStatusChanged, this, boost::placeholders::_1)); ++ wallet->NotifyAddressBookChanged.disconnect(boost::bind(NotifyAddressBookChanged, this, boost::placeholders::_1, boost::placeholders::_2, boost::placeholders::_3, boost::placeholders::_4, boost::placeholders::_5)); ++ wallet->NotifyTransactionChanged.disconnect(boost::bind(NotifyTransactionChanged, this, boost::placeholders::_1, boost::placeholders::_2, boost::placeholders::_3)); + } + + // WalletModel::UnlockContext implementation diff --git a/academic/antiprism/antiprism.SlackBuild b/academic/antiprism/antiprism.SlackBuild index 271184a166..f3c6c291e6 100644 --- a/academic/antiprism/antiprism.SlackBuild +++ b/academic/antiprism/antiprism.SlackBuild @@ -55,7 +55,7 @@ find -L . \ sed "/^docdir/s|= .*|= @docdir@|" -i Makefile.in CFLAGS="$SLKCFLAGS" \ -CXXFLAGS="$SLKCFLAGS" \ +CXXFLAGS="$SLKCFLAGS -fpermissive" \ ./configure \ --prefix=/usr \ --libdir=/usr/lib$LIBDIRSUFFIX \ diff --git a/academic/artha/artha.SlackBuild b/academic/artha/artha.SlackBuild index 53eb0478d2..dbb2a3bf9c 100644 --- a/academic/artha/artha.SlackBuild +++ b/academic/artha/artha.SlackBuild @@ -5,13 +5,13 @@ # Written by Mikhail Zotov <mikhail dot ru at gmail dot com> PRGNAM=artha -VERSION=${VERSION:-1.0.3} +VERSION=${VERSION:-1.0.5} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} if [ -z "$ARCH" ]; then case "$( uname -m )" in - i?86) ARCH=i486 ;; + i?86) ARCH=i586 ;; arm*) ARCH=arm ;; *) ARCH=$( uname -m ) ;; esac @@ -22,8 +22,8 @@ TMP=${TMP:-/tmp/SBo} PKG=$TMP/package-$PRGNAM OUTPUT=${OUTPUT:-/tmp} -if [ "$ARCH" = "i486" ]; then - SLKCFLAGS="-O2 -march=i486 -mtune=i686" +if [ "$ARCH" = "i586" ]; then + SLKCFLAGS="-O2 -march=i586 -mtune=i686" LIBDIRSUFFIX="" elif [ "$ARCH" = "i686" ]; then SLKCFLAGS="-O2 -march=i686 -mtune=i686" diff --git a/academic/artha/artha.info b/academic/artha/artha.info index 1512888a8b..40037f5817 100644 --- a/academic/artha/artha.info +++ b/academic/artha/artha.info @@ -1,8 +1,8 @@ PRGNAM="artha" -VERSION="1.0.3" +VERSION="1.0.5" HOMEPAGE="http://artha.sourceforge.net/" -DOWNLOAD="http://ponce.cc/slackware/sources/repo/artha-1.0.3.tar.bz2" -MD5SUM="9bc69f5666a1f494e21a0a0add9ebb16" +DOWNLOAD="https://downloads.sourceforge.net/artha/artha-1.0.5.tar.bz2" +MD5SUM="a916a7a943ac676a60f03cc839b04f37" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="WordNet" diff --git a/academic/geda-gaf/geda-gaf.info b/academic/geda-gaf/geda-gaf.info index 3664fa7fb5..1362c53982 100644 --- a/academic/geda-gaf/geda-gaf.info +++ b/academic/geda-gaf/geda-gaf.info @@ -5,6 +5,6 @@ DOWNLOAD="http://ftp.geda-project.org/geda-gaf/stable/v1.8/1.8.2/geda-gaf-1.8.2. MD5SUM="fa8a807615decf47027e22a217dd0ded" DOWNLOAD_x86_64="" MD5SUM_x86_64="" -REQUIRES="" +REQUIRES="guile1.8" MAINTAINER="Stephen Van Berg" EMAIL="stephen_van_berg@earlicker.com" diff --git a/academic/gelemental/gcc.patch b/academic/gelemental/gcc.patch new file mode 100644 index 0000000000..eeb16293d9 --- /dev/null +++ b/academic/gelemental/gcc.patch @@ -0,0 +1,12 @@ +diff -Naur gelemental-1.2.0.orig/src/dialogs.cc gelemental-1.2.0/src/dialogs.cc +--- gelemental-1.2.0.orig/src/dialogs.cc 2007-09-25 06:49:33.000000000 +0200 ++++ gelemental-1.2.0/src/dialogs.cc 2017-07-27 21:45:34.356776770 +0200 +@@ -247,7 +247,7 @@ + const Gtk::TreePath& tpath, bool) + { + Gtk::TreeIter iter = store->get_iter (tpath); +- return iter ? iter->get_value (cols.property) : false; ++ return iter ? static_cast<bool>(iter->get_value (cols.property)) : false; + } + + diff --git a/academic/gelemental/gelemental.SlackBuild b/academic/gelemental/gelemental.SlackBuild index e4b332e18a..d2ae765eb6 100644 --- a/academic/gelemental/gelemental.SlackBuild +++ b/academic/gelemental/gelemental.SlackBuild @@ -70,6 +70,9 @@ find -L . \ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; +# Fix for the newer gcc +patch -p1 -i $CWD/gcc.patch + CFLAGS="$SLKCFLAGS" \ CXXFLAGS="$SLKCFLAGS -std=c++11" \ ./configure \ diff --git a/academic/genius/README b/academic/genius/README index d4a270574c..fa2fa4b67b 100644 --- a/academic/genius/README +++ b/academic/genius/README @@ -7,5 +7,5 @@ or educational tool. The syntax is very intuitive and is designed to mimic how mathematics is usually written. If you would like the GUI interface as well, it requires -libgnomeui and gtksourceview. If you have these dependencies, +libgnomeui, gtksourceview and vte2. If you have these dependencies, pass the variable of GNOME=YES (or anything that isn't NO ;) diff --git a/academic/genometools/genometools.SlackBuild b/academic/genometools/genometools.SlackBuild index 0814b7dc9e..6b3c0a762c 100644 --- a/academic/genometools/genometools.SlackBuild +++ b/academic/genometools/genometools.SlackBuild @@ -77,7 +77,7 @@ sed -i "s:lib/libgenometools:lib${LIBDIRSUFFIX}/libgenometools:g" Makefile sed -i "s:\$(prefix)/lib:\$(prefix)/lib${LIBDIRSUFFIX}:g" Makefile sed -i "s:/share/man/:/man/:g" Makefile -CFLAGS="$SLKCFLAGS" \ +CFLAGS="$SLKCFLAGS -Wno-error=format-truncation=" \ CXXFLAGS="$SLKCFLAGS" \ make $BUILDARCH \ prefix=/usr diff --git a/academic/kile/README b/academic/kile/README deleted file mode 100644 index d083e911fe..0000000000 --- a/academic/kile/README +++ /dev/null @@ -1,4 +0,0 @@ -To build Kile, you will need a Latex distribution like TeTeX or -Tex-Live. Slackware 13.0 (and lower) include the former distribution -and it is available on the installation disk(s) if you did not do a -full install. diff --git a/academic/kile/doinst.sh b/academic/kile/doinst.sh deleted file mode 100644 index aea0f894eb..0000000000 --- a/academic/kile/doinst.sh +++ /dev/null @@ -1,13 +0,0 @@ -if [ -x /usr/bin/update-desktop-database ]; then - /usr/bin/update-desktop-database -q usr/share/applications >/dev/null 2>&1 -fi - -if [ -x /usr/bin/update-mime-database ]; then - /usr/bin/update-mime-database usr/share/mime >/dev/null 2>&1 -fi - -if [ -e usr/share/icons/hicolor/icon-theme.cache ]; then - if [ -x /usr/bin/gtk-update-icon-cache ]; then - /usr/bin/gtk-update-icon-cache -f usr/share/icons/hicolor >/dev/null 2>&1 - fi -fi diff --git a/academic/kile/kile.SlackBuild b/academic/kile/kile.SlackBuild deleted file mode 100644 index 8b054abe8f..0000000000 --- a/academic/kile/kile.SlackBuild +++ /dev/null @@ -1,96 +0,0 @@ -#!/bin/sh - -# Slackware build script for Kile - -# Copyright 2012 Heinz Wiesinger, Amsterdam, The Netherlands -# All rights reserved. -# -# Redistribution and use of this script, with or without modification, is -# permitted provided that the following conditions are met: -# -# 1. Redistributions of this script must retain the above copyright -# notice, this list of conditions and the following disclaimer. -# -# THIS SOFTWARE IS PROVIDED BY THE AUTHOR ''AS IS'' AND ANY EXPRESS OR IMPLIED -# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF -# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO -# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, -# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, -# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; -# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, -# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR -# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF -# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. - -PRGNAM=kile -VERSION=${VERSION:-2.1.3} -BUILD=${BUILD:-1} -TAG=${TAG:-_SBo} - -if [ -z "$ARCH" ]; then - case "$( uname -m )" in - i?86) ARCH=i486 ;; - arm*) ARCH=arm ;; - *) ARCH=$( uname -m ) ;; - esac -fi - -CWD=$(pwd) -TMP=${TMP:-/tmp/SBo} -PKG=$TMP/package-$PRGNAM -OUTPUT=${OUTPUT:-/tmp} - -if [ "$ARCH" = "i486" ]; then - SLKCFLAGS="-O2 -march=i486 -mtune=i686" - LIBDIRSUFFIX="" -elif [ "$ARCH" = "i686" ]; then - SLKCFLAGS="-O2 -march=i686 -mtune=i686" - LIBDIRSUFFIX="" -elif [ "$ARCH" = "x86_64" ]; then - SLKCFLAGS="-O2 -fPIC" - LIBDIRSUFFIX="64" -else - SLKCFLAGS="-O2" - LIBDIRSUFFIX="" -fi - -set -e - -rm -rf $PKG -mkdir -p $TMP $PKG $OUTPUT -cd $TMP -rm -rf $PRGNAM-$VERSION -tar xvf $CWD/$PRGNAM-$VERSION.tar.bz2 -cd $PRGNAM-$VERSION -chown -R root:root . -find -L . \ - \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 -o -perm 511 \) \ - -exec chmod 755 {} \; -o \ - \( -perm 666 -o -perm 664 -o -perm 600 -o -perm 444 -o -perm 440 -o -perm 400 \) \ - -exec chmod 644 {} \; - -mkdir build && cd build - cmake \ - -DCMAKE_C_FLAGS="$SLKCFLAGS" \ - -DCMAKE_CXX_FLAGS="$SLKCFLAGS" \ - -DCMAKE_INSTALL_PREFIX=/usr \ - -DLIB_SUFFIX="$LIBDIRSUFFIX" \ - .. - make - make install DESTDIR=$PKG -cd - - -find $PKG | xargs file | grep -e "executable" -e "shared object" | grep ELF \ - | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true - -mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION -cp -a AUTHORS ChangeLog COPYING* README* \ - $PKG/usr/doc/$PRGNAM-$VERSION/ -cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild - -mkdir -p $PKG/install -cat $CWD/slack-desc > $PKG/install/slack-desc -cat $CWD/doinst.sh > $PKG/install/doinst.sh - -cd $PKG -/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz} diff --git a/academic/kile/kile.info b/academic/kile/kile.info deleted file mode 100644 index edc969bd33..0000000000 --- a/academic/kile/kile.info +++ /dev/null @@ -1,10 +0,0 @@ -PRGNAM="kile" -VERSION="2.1.3" -HOMEPAGE="http://kile.sourceforge.net/" -DOWNLOAD="http://downloads.sourceforge.net/kile/kile-2.1.3.tar.bz2" -MD5SUM="f3129e73eea21890c40781de80b44808" -DOWNLOAD_x86_64="" -MD5SUM_x86_64="" -REQUIRES="" -MAINTAINER="Heinz Wiesinger" -EMAIL="pprkut@liwjatan.at" diff --git a/academic/kile/slack-desc b/academic/kile/slack-desc deleted file mode 100644 index a98e5da34c..0000000000 --- a/academic/kile/slack-desc +++ /dev/null @@ -1,19 +0,0 @@ -# HOW TO EDIT THIS FILE: -# The "handy ruler" below makes it easier to edit a package description. -# Line up the first '|' above the ':' following the base package name, and -# the '|' on the right side marks the last column you can put a character in. -# You must make exactly 11 lines for the formatting to be correct. It's also -# customary to leave one space after the ':' except on otherwise blank lines. - - |-----handy-ruler------------------------------------------------------| -kile: kile (Latex editor) -kile: -kile: Kile is a user friendly TeX/LaTeX editor for the KDE -kile: desktop environment. -kile: This package is a Beta version for use with KDE 4. -kile: -kile: Homepage: http://kile.sourceforge.net/ -kile: License: GNU General Public License v2 -kile: -kile: -kile: diff --git a/academic/libqalculate/README b/academic/libqalculate/README deleted file mode 100644 index aa40e23964..0000000000 --- a/academic/libqalculate/README +++ /dev/null @@ -1,4 +0,0 @@ -Qalculate! is a multi-purpose desktop calculator for GNU/Linux (and Mac -OS). It is small and simple to use but with much power and versatility -underneath. Features include customizable functions, units, arbitrary -precision, plotting, and a user-friendly interface (GTK+ and CLI). diff --git a/academic/libqalculate/libqalculate.SlackBuild b/academic/libqalculate/libqalculate.SlackBuild deleted file mode 100644 index 9d906e36f5..0000000000 --- a/academic/libqalculate/libqalculate.SlackBuild +++ /dev/null @@ -1,102 +0,0 @@ -#!/bin/sh - -# Slackware build script for libqalculate - -# Copyright 2016-2020 Larry Hajali <larryhaja[at]gmail[dot]com> -# All rights reserved. -# -# Redistribution and use of this script, with or without modification, is -# permitted provided that the following conditions are met: -# -# 1. Redistributions of this script must retain the above copyright -# notice, this list of conditions and the following disclaimer. -# -# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED -# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF -# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO -# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, -# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, -# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; -# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, -# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR -# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF -# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. - -PRGNAM=libqalculate -VERSION=${VERSION:-3.10.0} -BUILD=${BUILD:-1} -TAG=${TAG:-_SBo} - -if [ -z "$ARCH" ]; then - case "$( uname -m )" in - i?86) ARCH=i586 ;; - arm*) ARCH=arm ;; - *) ARCH=$( uname -m ) ;; - esac -fi - -CWD=$(pwd) -TMP=${TMP:-/tmp/SBo} -PKG=$TMP/package-$PRGNAM -OUTPUT=${OUTPUT:-/tmp} - -if [ "$ARCH" = "i586" ]; then - SLKCFLAGS="-O2 -march=i586 -mtune=i686" - LIBDIRSUFFIX="" -elif [ "$ARCH" = "i686" ]; then - SLKCFLAGS="-O2 -march=i686 -mtune=i686" - LIBDIRSUFFIX="" -elif [ "$ARCH" = "x86_64" ]; then - SLKCFLAGS="-O2 -fPIC" - LIBDIRSUFFIX="64" -else - SLKCFLAGS="-O2" - LIBDIRSUFFIX="" -fi - -set -e - -rm -rf $PKG -mkdir -p $TMP $PKG $OUTPUT -cd $TMP -rm -rf $PRGNAM-$VERSION -tar xvf $CWD/$PRGNAM-$VERSION.tar.gz -cd $PRGNAM-$VERSION -chown -R root:root . -find -L . \ - \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \ - -o -perm 511 \) -exec chmod 755 {} \; -o \ - \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ - -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; - -CFLAGS="$SLKCFLAGS" \ -CXXFLAGS="$SLKCFLAGS" \ -./configure \ - --prefix=/usr \ - --libdir=/usr/lib${LIBDIRSUFFIX} \ - --docdir=/usr/doc/$PRGNAM-$VERSION \ - --mandir=/usr/man \ - --disable-silent-rules \ - --enable-static=no \ - --disable-rpath \ - --enable-defs2doc \ - --with-libcurl \ - --with-icu \ - --build=$ARCH-slackware-linux - -make -make install DESTDIR=$PKG - -find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \ - | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true - -find $PKG/usr/man -type f -exec gzip -9 {} \; - -cp -a AUTHORS ChangeLog COPYING NEWS README* TODO $PKG/usr/doc/$PRGNAM-$VERSION -cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild - -mkdir -p $PKG/install -cat $CWD/slack-desc > $PKG/install/slack-desc - -cd $PKG -/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz} diff --git a/academic/libqalculate/libqalculate.info b/academic/libqalculate/libqalculate.info deleted file mode 100644 index a2ac9c6801..0000000000 --- a/academic/libqalculate/libqalculate.info +++ /dev/null @@ -1,10 +0,0 @@ -PRGNAM="libqalculate" -VERSION="3.10.0" -HOMEPAGE="https://qalculate.github.io/" -DOWNLOAD="https://github.com/Qalculate/libqalculate/releases/download/v3.10.0/libqalculate-3.10.0.tar.gz" -MD5SUM="2f68e3dfeb36de2c88fc7078cb86ab4c" -DOWNLOAD_x86_64="" -MD5SUM_x86_64="" -REQUIRES="" -MAINTAINER="Larry Hajali" -EMAIL="larryhaja[at]gmail[dot]com" diff --git a/academic/libqalculate/slack-desc b/academic/libqalculate/slack-desc deleted file mode 100644 index 84c06b2451..0000000000 --- a/academic/libqalculate/slack-desc +++ /dev/null @@ -1,19 +0,0 @@ -# HOW TO EDIT THIS FILE: -# The "handy ruler" below makes it easier to edit a package description. -# Line up the first '|' above the ':' following the base package name, and -# the '|' on the right side marks the last column you can put a character in. -# You must make exactly 11 lines for the formatting to be correct. It's also -# customary to leave one space after the ':' except on otherwise blank lines. - - |-----handy-ruler------------------------------------------------------| -libqalculate: libqalculate (desktop caculator library) -libqalculate: -libqalculate: Qalculate! is a multi-purpose desktop calculator for GNU/Linux (and -libqalculate: Mac OS). It is small and simple to use but with much power and -libqalculate: versatility underneath. Features include customizable functions, -libqalculate: units, arbitrary precision, plotting, and a user-friendly interface -libqalculate: (GTK+ and CLI). -libqalculate: -libqalculate: Homepage: http://qalculate.github.io/ -libqalculate: -libqalculate: diff --git a/academic/primer3/primer3.SlackBuild b/academic/primer3/primer3.SlackBuild index d3ae1b399c..514f65fd23 100644 --- a/academic/primer3/primer3.SlackBuild +++ b/academic/primer3/primer3.SlackBuild @@ -75,13 +75,11 @@ patch -p1 -i $CWD/gcc-7.patch cd ./src # Use our CFLAGS -sed -i "/^CFLAGS/s/=/+=/" Makefile +sed -i -e "s|-O2|$SLKCFLAGS|" -e "s|-g -Wall|-fpermissive|" Makefile # Look for configuration files in /usr/share instead of /opt sed -i "s:/opt/primer3_config:/usr/share/$PRGNAM/primer3_config:g" thal_main.c primer3_boulder_main.c -CFLAGS="$SLKCFLAGS" \ -CXXFLAGS="$SLKCFLAGS" \ make # This is recommended, but the tests take a really long time. Be patient diff --git a/academic/pulseview/pulseview.SlackBuild b/academic/pulseview/pulseview.SlackBuild index afeee1876a..65f1943ebf 100644 --- a/academic/pulseview/pulseview.SlackBuild +++ b/academic/pulseview/pulseview.SlackBuild @@ -23,7 +23,7 @@ # ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. PRGNAM=pulseview -VERSION=${VERSION:-0.4.1} +VERSION=${VERSION:-20210103_d023660} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} @@ -60,7 +60,7 @@ rm -rf $PKG mkdir -p $TMP $PKG $OUTPUT cd $TMP rm -rf $PRGNAM-$VERSION -tar xvf $CWD/$PRGNAM-$VERSION.tar.gz +tar xvf $CWD/$PRGNAM-$VERSION.tar.?z cd $PRGNAM-$VERSION chown -R root:root . find -L . \ diff --git a/academic/pulseview/pulseview.info b/academic/pulseview/pulseview.info index 631c5fefbc..29f53cc1eb 100644 --- a/academic/pulseview/pulseview.info +++ b/academic/pulseview/pulseview.info @@ -1,8 +1,8 @@ PRGNAM="pulseview" -VERSION="0.4.1" +VERSION="20210103_d023660" HOMEPAGE="https://sigrok.org/wiki/PulseView" -DOWNLOAD="https://sigrok.org/download/source/pulseview/pulseview-0.4.1.tar.gz" -MD5SUM="6056c6e42cc6eae094110cac2351558a" +DOWNLOAD="http://ponce.cc/slackware/sources/repo/pulseview-20210103_d023660.tar.xz" +MD5SUM="b9160d5d5777d723db68b5139a4b4ea6" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="qt5 libsigrok libsigrokdecode" diff --git a/academic/root/root.SlackBuild b/academic/root/root.SlackBuild index bb507f0536..e0ec409dca 100644 --- a/academic/root/root.SlackBuild +++ b/academic/root/root.SlackBuild @@ -18,7 +18,7 @@ # Modified by the slackbuilds.org project PRGNAM=root -VERSION=${VERSION:-5.34.36} +VERSION=${VERSION:-6.10.02} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} @@ -79,9 +79,9 @@ fi rm -rf $PKG mkdir -p $TMP $PKG $OUTPUT cd $TMP -rm -rf $PRGNAM +rm -rf $PRGNAM-$VERSION tar xvf $CWD/$PRGNAM\_v$VERSION.source.tar.gz -cd $PRGNAM +cd $PRGNAM-$VERSION chown -R root:root . find -L . \ \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \ @@ -134,9 +134,8 @@ mkdir -p $PKG$PYTHONDIR mv \ $PKG$PREFIX/lib$LIBDIRSUFFIX/*.py \ $PKG$PREFIX/lib$LIBDIRSUFFIX/*.pyc \ - $PKG$PREFIX/lib$LIBDIRSUFFIX/python/genreflex \ + $PKG$PREFIX/lib$LIBDIRSUFFIX/*.pyo \ $PKG$PYTHONDIR -rm -fr $PKG$PREFIX/lib$LIBDIRSUFFIX/python find $PKG | xargs file | grep -e "executable" -e "shared object" | grep ELF \ | cut -f 1 -d : | xargs strip --strip-unneded 2> /dev/null || true diff --git a/academic/root/root.info b/academic/root/root.info index 450e1bde00..7df5c81738 100644 --- a/academic/root/root.info +++ b/academic/root/root.info @@ -1,10 +1,10 @@ PRGNAM="root" -VERSION="5.34.36" +VERSION="6.10.02" HOMEPAGE="http://root.cern.ch/drupal/" -DOWNLOAD="https://root.cern.ch/download/root_v5.34.36.source.tar.gz" -MD5SUM="6a1ad549b3b79b10bbb1f116b49067ee" +DOWNLOAD="https://root.cern.ch/download/root_v6.10.02.source.tar.gz" +MD5SUM="19f2285c845a48355db779938fb4db99" DOWNLOAD_x86_64="" MD5SUM_x86_64="" -REQUIRES="ftgl" +REQUIRES="ftgl unixODBC" MAINTAINER="Jože Zobec" EMAIL="jozze.zepl@gmail.com" diff --git a/academic/sage/sage.SlackBuild b/academic/sage/sage.SlackBuild index 6cb41edaa4..d8f9bf7128 100644 --- a/academic/sage/sage.SlackBuild +++ b/academic/sage/sage.SlackBuild @@ -25,7 +25,7 @@ # ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. PRGNAM=sage -VERSION=${VERSION:-9.1} +VERSION=${VERSION:-9.2} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} diff --git a/academic/sage/sage.info b/academic/sage/sage.info index 141f25c9ef..e90ff5d18e 100644 --- a/academic/sage/sage.info +++ b/academic/sage/sage.info @@ -1,8 +1,8 @@ PRGNAM="sage" -VERSION="9.1" +VERSION="9.2" HOMEPAGE="http://www.sagemath.org" -DOWNLOAD="http://mirrors.mit.edu/sage/src/sage-9.1.tar.gz" -MD5SUM="35e0ecbc6cc2ae4e1a68479598e70b7a" +DOWNLOAD="http://mirrors.mit.edu/sage/src/sage-9.2.tar.gz" +MD5SUM="fe61d651df8e12a0b657f8447cb622ad" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="" diff --git a/academic/scipy3/scipy3.SlackBuild b/academic/scipy3/scipy3.SlackBuild index 22cbb37f31..bd54ad5152 100644 --- a/academic/scipy3/scipy3.SlackBuild +++ b/academic/scipy3/scipy3.SlackBuild @@ -30,7 +30,7 @@ PRGNAM="scipy3" SRCNAM="scipy" -VERSION=${VERSION:-1.1.0} +VERSION=${VERSION:-1.5.4} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} diff --git a/academic/scipy3/scipy3.info b/academic/scipy3/scipy3.info index afdc113a2e..12af2fd433 100644 --- a/academic/scipy3/scipy3.info +++ b/academic/scipy3/scipy3.info @@ -1,8 +1,8 @@ PRGNAM="scipy3" -VERSION="1.1.0" +VERSION="1.5.4" HOMEPAGE="https://www.scipy.org/" -DOWNLOAD="https://github.com/scipy/scipy/releases/download/v1.1.0/scipy-1.1.0.tar.gz" -MD5SUM="aa6bcc85276b6f25e17bcfc4dede8718" +DOWNLOAD="https://github.com/scipy/scipy/releases/download/v1.5.4/scipy-1.5.4.tar.gz" +MD5SUM="293401ee7ac354a2f2313373b497f40e" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="numpy3 lapack" diff --git a/academic/tophat/make_pair.patch b/academic/tophat/make_pair.patch new file mode 100644 index 0000000000..44b71d1059 --- /dev/null +++ b/academic/tophat/make_pair.patch @@ -0,0 +1,24 @@ +diff -uBw -aur tophat-2.1.1/src/juncs_db.cpp tophat-2.1.1-patched/src/juncs_db.cpp +--- tophat-2.1.1/src/juncs_db.cpp 2016-02-14 19:21:17.354079000 +0100 ++++ tophat-2.1.1-patched/src/juncs_db.cpp 2016-06-02 11:26:34.097425159 +0200 +@@ -338,7 +338,7 @@ + uint32_t left_coord = atoi(scan_left_coord); + uint32_t right_coord = atoi(scan_right_coord); + bool antisense = *orientation == '-'; +- junctions.insert(make_pair<Junction, JunctionStats>(Junction(ref_id, left_coord, right_coord, antisense), JunctionStats())); ++ junctions.insert(make_pair(Junction(ref_id, left_coord, right_coord, antisense), JunctionStats())); + } + } + +diff -uBw -aur tophat-2.1.1/src/tophat_reports.cpp tophat-2.1.1-patched/src/tophat_reports.cpp +--- tophat-2.1.1/src/tophat_reports.cpp 2016-02-23 22:20:44.320710000 +0100 ++++ tophat-2.1.1-patched/src/tophat_reports.cpp 2016-06-02 11:26:22.057239478 +0200 +@@ -2705,7 +2705,7 @@ + junction_stat.gtf_match = true; + junction_stat.accepted = true; + +- gtf_junctions.insert(make_pair<Junction, JunctionStats>(Junction(ref_id, left_coord, right_coord, antisense), junction_stat)); ++ gtf_junctions.insert(make_pair(Junction(ref_id, left_coord, right_coord, antisense), junction_stat)); + } + } + fprintf(stderr, "Loaded %d GFF junctions from %s.\n", (int)(gtf_junctions.size()), gtf_juncs.c_str()); diff --git a/academic/tophat/tophat.SlackBuild b/academic/tophat/tophat.SlackBuild index f32fb590f5..e3e97fcc85 100644 --- a/academic/tophat/tophat.SlackBuild +++ b/academic/tophat/tophat.SlackBuild @@ -69,6 +69,9 @@ find -L . \ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; +# Thanks archlinux +patch -p1 < $CWD/make_pair.patch + ./autogen.sh CFLAGS="$SLKCFLAGS" \ diff --git a/academic/ugene/ugene-1.22.0-dont_hardcode_includes.patch b/academic/ugene/ugene-1.22.0-dont_hardcode_includes.patch new file mode 100644 index 0000000000..6bc26e1f19 --- /dev/null +++ b/academic/ugene/ugene-1.22.0-dont_hardcode_includes.patch @@ -0,0 +1,24 @@ +diff -up ugene-1.22.0/src/libs_3rdparty/samtools/samtools.pri.dont_hardcode_includes ugene-1.22.0/src/libs_3rdparty/samtools/samtools.pri +--- ugene-1.22.0/src/libs_3rdparty/samtools/samtools.pri.dont_hardcode_includes 2016-03-31 07:21:56.000000000 -0500 ++++ ugene-1.22.0/src/libs_3rdparty/samtools/samtools.pri 2016-06-02 17:49:02.383069490 -0500 +@@ -3,7 +3,7 @@ UGENE_RELATIVE_DESTDIR = '' + + TEMPLATE = lib + CONFIG +=thread debug_and_release staticlib warn_off +-INCLUDEPATH += src src/samtools ../../include /usr/include ++INCLUDEPATH += src src/samtools ../../include + win32 : INCLUDEPATH += src/samtools/win32 + DEFINES+="_FILE_OFFSET_BITS=64" _LARGEFILE64_SOURCE _USE_KNETFILE + win32 : DEFINES += _USE_MATH_DEFINES "inline=__inline" "__func__=__FUNCTION__" "R_OK=4" "atoll=_atoi64" "alloca=_alloca" +diff -up ugene-1.22.0/src/plugins_3rdparty/variants/variants.pri.dont_hardcode_includes ugene-1.22.0/src/plugins_3rdparty/variants/variants.pri +--- ugene-1.22.0/src/plugins_3rdparty/variants/variants.pri.dont_hardcode_includes 2016-03-31 07:22:09.000000000 -0500 ++++ ugene-1.22.0/src/plugins_3rdparty/variants/variants.pri 2016-06-02 20:26:35.265356432 -0500 +@@ -20,7 +20,7 @@ use_bundled_zlib() { + win32 : LIBS += -lwsock32 + + +-INCLUDEPATH += src ../../include /usr/include ++INCLUDEPATH += src ../../include + INCLUDEPATH += ../../libs_3rdparty/samtools/src/samtools + INCLUDEPATH += ../../libs_3rdparty/samtools/src + INCLUDEPATH += ../../libs_3rdparty/samtools/src/samtools/bcftools diff --git a/academic/ugene/ugene.SlackBuild b/academic/ugene/ugene.SlackBuild index 45a5a5885a..9ebc39636d 100644 --- a/academic/ugene/ugene.SlackBuild +++ b/academic/ugene/ugene.SlackBuild @@ -73,6 +73,9 @@ find -L . \ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; +# Thanks fedora +patch -p1 < $CWD/ugene-1.22.0-dont_hardcode_includes.patch + # Fix libraries and man pages paths sed -i "s:/lib:/lib${LIBDIRSUFFIX}:g" src/ugene_globals.pri sed -i "s:/share/man:/man:g" src/ugene_globals.pri diff --git a/academic/veusz/veusz.SlackBuild b/academic/veusz/veusz.SlackBuild index b11846a622..6be6101ac4 100644 --- a/academic/veusz/veusz.SlackBuild +++ b/academic/veusz/veusz.SlackBuild @@ -69,8 +69,7 @@ find -L . \ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; -PYTHONVER=$(python -V 2>&1 | cut -f 2 -d' ' | cut -f 1-2 -d.) -export SIP_EXE=/usr/bin/python3-sip +export SIP_EXE=/usr/bin/sip3 python3 setup.py install --root $PKG |