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-rw-r--r--academic/HMMER/HMMER.SlackBuild29
1 files changed, 21 insertions, 8 deletions
diff --git a/academic/HMMER/HMMER.SlackBuild b/academic/HMMER/HMMER.SlackBuild
index 02b15867cd..923c84093c 100644
--- a/academic/HMMER/HMMER.SlackBuild
+++ b/academic/HMMER/HMMER.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for HMMER
-# Copyright 2016-2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2016-2023 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,11 +22,15 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=HMMER
-SRCNAM=hmmer
-VERSION=${VERSION:-3.2.1}
+VERSION=${VERSION:-3.4}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
+
+SRCNAM=hmmer
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -91,13 +102,15 @@ find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | gr
find $PKG/usr/man -type f -exec gzip -9 {} \;
for i in $( find $PKG/usr/man -type l ) ; do ln -s $( readlink $i ).gz $i.gz ; rm $i ; done
+chmod 0644 $PKG/usr/man/man1/*
+
# Include some tutorial examples
mkdir -p $PKG/usr/share/$PRGNAM
-cp -a tutorial/* $PKG/usr/share/$PRGNAM
+cp -a testsuite tutorial $PKG/usr/share/$PRGNAM
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
cp -a \
- INSTALL LICENSE README.md RELEASE-$VERSION Userguide.pdf \
+ INSTALL LICENSE README.md RELEASE-$VERSION.md Userguide.pdf \
$PKG/usr/doc/$PRGNAM-$VERSION
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
@@ -105,4 +118,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE