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author Rob van Nues2020-01-03 02:48:06 +0100
committer Robby Workman2020-01-03 06:33:50 +0100
commita570db958dcae2607e88496fb809004ad14c9945 (patch)
tree79941957bc9dcf04ea63fd912f35d051eeb04b9f /libraries
parentae03a581a66245780b77d98a297a0543f73147d4 (diff)
downloadslackbuilds-a570db958dcae2607e88496fb809004ad14c9945.tar.gz
libraries/htslib: Updated for version 1.10.2.
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
Diffstat (limited to 'libraries')
-rw-r--r--libraries/htslib/README11
-rw-r--r--libraries/htslib/htslib.SlackBuild4
-rw-r--r--libraries/htslib/htslib.info6
-rw-r--r--libraries/htslib/slack-desc8
4 files changed, 15 insertions, 14 deletions
diff --git a/libraries/htslib/README b/libraries/htslib/README
index de684e9028..05556cf5bb 100644
--- a/libraries/htslib/README
+++ b/libraries/htslib/README
@@ -1,7 +1,8 @@
-Prior to the introduction of HTSlib, SAMtools and BCFtools were distributed
-in a single samtools-0.1.x package.
-This old version remains available from SBo as samtools-legacy
+Prior to the introduction of HTSlib, SAMtools and BCFtools were distributed
+in a single samtools-0.1.x package. This old version remains available from
+SBo as samtools-legacy.
-HTSlib has been distributed as a separate package to facilitate the writing
+HTSlib has been distributed as a separate package to facilitate the writing
of programs against the HTSlib API. HTSlib also provides the bgzip, htsfile,
-and tabix utilities, so the installation of HTSlib provides these utilities as well.
+and tabix utilities, so the installation of HTSlib provides these utilities
+as well.
diff --git a/libraries/htslib/htslib.SlackBuild b/libraries/htslib/htslib.SlackBuild
index 230f89047b..b45a1bac01 100644
--- a/libraries/htslib/htslib.SlackBuild
+++ b/libraries/htslib/htslib.SlackBuild
@@ -2,7 +2,7 @@
# Slackware build script for htslib
-# Copyright 2018 rob van nues # All rights reserved.
+# Copyright 2018-2020 Rob van Nues # All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
# permitted provided that the following conditions are met:
@@ -22,7 +22,7 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
PRGNAM=htslib
-VERSION=${VERSION:-1.9}
+VERSION=${VERSION:-1.10.2}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
diff --git a/libraries/htslib/htslib.info b/libraries/htslib/htslib.info
index 5151ea72b5..79a3d799d3 100644
--- a/libraries/htslib/htslib.info
+++ b/libraries/htslib/htslib.info
@@ -1,8 +1,8 @@
PRGNAM="htslib"
-VERSION="1.9"
+VERSION="1.10.2"
HOMEPAGE="http://www.htslib.org"
-DOWNLOAD="https://github.com/samtools/htslib/releases/download/1.9/htslib-1.9.tar.bz2"
-MD5SUM="2ac92c9c3eef9986345ac69a05dd4d24"
+DOWNLOAD="https://github.com/samtools/htslib/releases/download/1.10.2/htslib-1.10.2.tar.bz2"
+MD5SUM="9b03764c4809388625ab0b6352b13c93"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
diff --git a/libraries/htslib/slack-desc b/libraries/htslib/slack-desc
index 5d7ac1f556..c26f985a51 100644
--- a/libraries/htslib/slack-desc
+++ b/libraries/htslib/slack-desc
@@ -11,9 +11,9 @@ htslib:
htslib: HTSlib is an implementation of a unified C library for accessing
htslib: common file formats, such as SAM, CRAM and VCF, used for high-
htslib: throughput sequencing data, and is the core library used by samtools
-htslib: and bcftools. HTSlib only depends on zlib. It is known to be
-htslib: compatible with gcc, g++ and clang. This is an independent package
-htslib: to provide the HTSlib API for other programs.
+htslib: and bcftools. It is known to be compatible with gcc, g++ and clang.
+htslib: HTSlib also provides the bgzip, htsfile, and tabix utilities.
+htslib:
+htslib: Homepage: http://www.htslib.org
htslib:
-htslib: Home: http://www.htslib.org
htslib: